| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904587
Identifier: 220904587
GI number: 220904587
Start: 1568033
End: 1569742
Strand: Direct
Name: 220904587
Synonym: Ddes_1319
Alternate gene names: NA
Gene position: 1568033-1569742 (Clockwise)
Preceding gene: 220904586
Following gene: 220904588
Centisome position: 54.57
GC content: 56.08
Gene sequence:
>1710_bases GTGAAATATAAATACCGGCATTTTTCGGTACGCGTTGTCTTGGTCCGCCTTGCCCTGCTGGTCTGCCTGTTCGGCGCGAG CATGCCGATGGATCGCGCCGAAGCCGCCCTGGCCCGCAAAGGTGAGCTGACTGTTGCAGACGCCTGCGATCCCAAACCTG CGGCTGACGATATCCTGCTGCCCATGCCCTGTGGACTCAACATGGCTTTCAAGCTGGTGGCCGTGCCTGCCAAAGGGCTT TTGTGGGATATGCCCATGCGCCCTGGTGTGGACGACAGCGCCAACACAAGCCGTGCGTTCTATGACCGCCGCTATAATAC CGCACTTTCCGGCGCGTTTACCCTTGAAGATCTGCCGCCGGACTGGCGCAGGCTTGCCCCCAGGGGACAGAACTACTTTT ATCTTGTAGCAAAGTATGAAGTCTCCAACCTGCAATGGCAGGCCGTCATGGATGCGTCCTGCCCCGCCGCCCATCCACCT GCAGCCAGCGCCGCAAAGCCGGTGACAGATATAAGCTGGTATGATGCCGTGGACTTCACCCGCAAGTATACCGCCTGGCT TTTGCAAAACTCGCCGCAGTCCCTCCCCCGCTTTTCCGGCGACAGCCGTAATGTGGGTTTTGTGCGCCTGCCTACGGAAA CGGAATGGGAATACGCCGCCCGAGGTGGGCATATGGCAGGCAGCCAGCAACTCCTGCAAGAAGATTTCTTTGCTCTGCCG CCCGAGGCCAGCAAGGCCGACTACGCCGTTTATCGGCCGGAAGGCGCGGCCAGGGCAGAAGAAACCGCCAACATCGGCTC ACGCAAACCCAATCCTCTGGGTATATACGACACCGCAGGCAATGCGGCTGAAATGGTTCTGGACGCCTTTCGCTTTTCAC TGGCCGGAAGACTGCACGGCTCGGCGGGCGGTTTTGTGCGCAAGGGTGGTTCCTTTCTTTCCGGCGAAGCGGAAATTTTA CCCGGCCGGCGTGAAGAAACTCCGTTCTTCATGGCCGACGGTCCGGCTCATGCCCGCGATATGGGCTTTCGCCCCGTCAT TTCTGGCATTAATACTCCGGGAGGGCCACGCCCCCAGGAACTGCTGACAGAATGGGGCAAAGCCGGAGAATCAATGGAAG CTGCGGGCTACGATACGAAGGCCGCGCGCAATCCTCTTGAAGAGCTGGACCGGCTGCTGGCATCCGCCCCCAATGAGGCA GTGAAAAAAAACCTTCAGGAACTGCGCAATACTATTAAAGAAAACAATATCATGCTTGAGCGGCAGAAGCAGATGGAAGC GCAATCGCTCATACGCACCGGCGTGTACATGACAGAAACCATCCGCAACTACTCCATTCGCAGAAAATCTCTGCAATCCC AGTTAGATGGTATGCAAAGAGACAGTAAGGCAGCCAAGGGCGCCGAACTTGAAAAACTGCGTCAGATAATGGATACTGCC CGCAGAGGACTTGCCATGCTGGACACCAGCCTTGACAAGTCTCTGACCTTTTATCGCAGCAAGGTGGAAGACGGTGCGCA AATGGCACCGGAAACACTGTCAGCAGCTTATGATTCTCTGAACAAGGATTTCAGCGGCAGTGACCCCTTCAACGAAAATA TGCGGCGCAATCTTGATCTGTACCGCAAACATGTTGACTTGTTTCACAAAAACAAAACATTGCCGCGAGAGGTCATGCAA AAAGAAATTCTAGAACGTCGCTTCCAGTAG
Upstream 100 bases:
>100_bases CATTTTTTCATTGCCTTTGCCGCAGTGGCCGGACTTGCCGTGGCTGCGGCGCTGGGACCGGCACTGCGGGCCGCGCGCAT CGAACCTTCGGAGGTCATCC
Downstream 100 bases:
>100_bases CCAAAGGAGTGCTAACATGGCTGAAAAACTGCGCATAGGTTGGATTGGAACCGGGGTTATGGGTTTGTCCATGGCCGGTC ACCTGCAGGATGCGGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MKYKYRHFSVRVVLVRLALLVCLFGASMPMDRAEAALARKGELTVADACDPKPAADDILLPMPCGLNMAFKLVAVPAKGL LWDMPMRPGVDDSANTSRAFYDRRYNTALSGAFTLEDLPPDWRRLAPRGQNYFYLVAKYEVSNLQWQAVMDASCPAAHPP AASAAKPVTDISWYDAVDFTRKYTAWLLQNSPQSLPRFSGDSRNVGFVRLPTETEWEYAARGGHMAGSQQLLQEDFFALP PEASKADYAVYRPEGAARAEETANIGSRKPNPLGIYDTAGNAAEMVLDAFRFSLAGRLHGSAGGFVRKGGSFLSGEAEIL PGRREETPFFMADGPAHARDMGFRPVISGINTPGGPRPQELLTEWGKAGESMEAAGYDTKAARNPLEELDRLLASAPNEA VKKNLQELRNTIKENNIMLERQKQMEAQSLIRTGVYMTETIRNYSIRRKSLQSQLDGMQRDSKAAKGAELEKLRQIMDTA RRGLAMLDTSLDKSLTFYRSKVEDGAQMAPETLSAAYDSLNKDFSGSDPFNENMRRNLDLYRKHVDLFHKNKTLPREVMQ KEILERRFQ
Sequences:
>Translated_569_residues MKYKYRHFSVRVVLVRLALLVCLFGASMPMDRAEAALARKGELTVADACDPKPAADDILLPMPCGLNMAFKLVAVPAKGL LWDMPMRPGVDDSANTSRAFYDRRYNTALSGAFTLEDLPPDWRRLAPRGQNYFYLVAKYEVSNLQWQAVMDASCPAAHPP AASAAKPVTDISWYDAVDFTRKYTAWLLQNSPQSLPRFSGDSRNVGFVRLPTETEWEYAARGGHMAGSQQLLQEDFFALP PEASKADYAVYRPEGAARAEETANIGSRKPNPLGIYDTAGNAAEMVLDAFRFSLAGRLHGSAGGFVRKGGSFLSGEAEIL PGRREETPFFMADGPAHARDMGFRPVISGINTPGGPRPQELLTEWGKAGESMEAAGYDTKAARNPLEELDRLLASAPNEA VKKNLQELRNTIKENNIMLERQKQMEAQSLIRTGVYMTETIRNYSIRRKSLQSQLDGMQRDSKAAKGAELEKLRQIMDTA RRGLAMLDTSLDKSLTFYRSKVEDGAQMAPETLSAAYDSLNKDFSGSDPFNENMRRNLDLYRKHVDLFHKNKTLPREVMQ KEILERRFQ >Mature_569_residues MKYKYRHFSVRVVLVRLALLVCLFGASMPMDRAEAALARKGELTVADACDPKPAADDILLPMPCGLNMAFKLVAVPAKGL LWDMPMRPGVDDSANTSRAFYDRRYNTALSGAFTLEDLPPDWRRLAPRGQNYFYLVAKYEVSNLQWQAVMDASCPAAHPP AASAAKPVTDISWYDAVDFTRKYTAWLLQNSPQSLPRFSGDSRNVGFVRLPTETEWEYAARGGHMAGSQQLLQEDFFALP PEASKADYAVYRPEGAARAEETANIGSRKPNPLGIYDTAGNAAEMVLDAFRFSLAGRLHGSAGGFVRKGGSFLSGEAEIL PGRREETPFFMADGPAHARDMGFRPVISGINTPGGPRPQELLTEWGKAGESMEAAGYDTKAARNPLEELDRLLASAPNEA VKKNLQELRNTIKENNIMLERQKQMEAQSLIRTGVYMTETIRNYSIRRKSLQSQLDGMQRDSKAAKGAELEKLRQIMDTA RRGLAMLDTSLDKSLTFYRSKVEDGAQMAPETLSAAYDSLNKDFSGSDPFNENMRRNLDLYRKHVDLFHKNKTLPREVMQ KEILERRFQ
Specific function: Unknown
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63504; Mature: 63504
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKYRHFSVRVVLVRLALLVCLFGASMPMDRAEAALARKGELTVADACDPKPAADDILL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEE PMPCGLNMAFKLVAVPAKGLLWDMPMRPGVDDSANTSRAFYDRRYNTALSGAFTLEDLPP CCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCC DWRRLAPRGQNYFYLVAKYEVSNLQWQAVMDASCPAAHPPAASAAKPVTDISWYDAVDFT HHHHHCCCCCCEEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RKYTAWLLQNSPQSLPRFSGDSRNVGFVRLPTETEWEYAARGGHMAGSQQLLQEDFFALP HHHHHHHHCCCCHHCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHCCC PEASKADYAVYRPEGAARAEETANIGSRKPNPLGIYDTAGNAAEMVLDAFRFSLAGRLHG CCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC SAGGFVRKGGSFLSGEAEILPGRREETPFFMADGPAHARDMGFRPVISGINTPGGPRPQE CCCCHHHCCCCCCCCCHHCCCCCCCCCCEEEECCCCHHHHCCCHHHHHCCCCCCCCCHHH LLTEWGKAGESMEAAGYDTKAARNPLEELDRLLASAPNEAVKKNLQELRNTIKENNIMLE HHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEH RQKQMEAQSLIRTGVYMTETIRNYSIRRKSLQSQLDGMQRDSKAAKGAELEKLRQIMDTA HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RRGLAMLDTSLDKSLTFYRSKVEDGAQMAPETLSAAYDSLNKDFSGSDPFNENMRRNLDL HHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH YRKHVDLFHKNKTLPREVMQKEILERRFQ HHHHHHHHHCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKYKYRHFSVRVVLVRLALLVCLFGASMPMDRAEAALARKGELTVADACDPKPAADDILL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCEEE PMPCGLNMAFKLVAVPAKGLLWDMPMRPGVDDSANTSRAFYDRRYNTALSGAFTLEDLPP CCCCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCC DWRRLAPRGQNYFYLVAKYEVSNLQWQAVMDASCPAAHPPAASAAKPVTDISWYDAVDFT HHHHHCCCCCCEEEEEEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH RKYTAWLLQNSPQSLPRFSGDSRNVGFVRLPTETEWEYAARGGHMAGSQQLLQEDFFALP HHHHHHHHCCCCHHCCCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHCCC PEASKADYAVYRPEGAARAEETANIGSRKPNPLGIYDTAGNAAEMVLDAFRFSLAGRLHG CCCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC SAGGFVRKGGSFLSGEAEILPGRREETPFFMADGPAHARDMGFRPVISGINTPGGPRPQE CCCCHHHCCCCCCCCCHHCCCCCCCCCCEEEECCCCHHHHCCCHHHHHCCCCCCCCCHHH LLTEWGKAGESMEAAGYDTKAARNPLEELDRLLASAPNEAVKKNLQELRNTIKENNIMLE HHHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEH RQKQMEAQSLIRTGVYMTETIRNYSIRRKSLQSQLDGMQRDSKAAKGAELEKLRQIMDTA HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RRGLAMLDTSLDKSLTFYRSKVEDGAQMAPETLSAAYDSLNKDFSGSDPFNENMRRNLDL HHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH YRKHVDLFHKNKTLPREVMQKEILERRFQ HHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA