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The map label for this gene is 220904582

Identifier: 220904582

GI number: 220904582

Start: 1560097

End: 1562733

Strand: Direct

Name: 220904582

Synonym: Ddes_1314

Alternate gene names: NA

Gene position: 1560097-1562733 (Clockwise)

Preceding gene: 220904581

Following gene: 220904583

Centisome position: 54.29

GC content: 57.57

Gene sequence:

>2637_bases
ATGGTTATGCAGCAGGATATGGACCTTGCGCGGCAGTGCCGCCAACTGGCGGATACAGCCGGACAGGCCGGAACATGGCT
TCAGGACAATGCCGGACTTGTGGGTGGCGAAAAAAACGCCCTTCTCAGGGATATGCGCCACGCAATCCGCTTTTTCGGCA
AGTGCGGGCAAGCGGCAGAACGCAAAATGTGCGTGGGCGTGTTCGGGCCAAGCCAGTCCGGCAAGTCATACCTTATCTCA
GCGCTCGCCAGTGACGCCAATGGAACGCTGCTGGCCGACTTTTGCGGTGAAAGTCATGATTTTCTGAAAAAAATCAACCC
CGAAGGCGGTAAAGAATCCACCGGGCTTGTCACGCGCTTCACCACAAGCCAGCCTGAAGGGCTTTCGCCGGAATTTCCCA
TCCGCCTGCGCCTGCTTTCTGAAACCGACGTGGCCCGCGTACTGGCCAACACCTACTATGCAGACTGCGACCATCAGGAT
GCTCCCGCAGCCGAGGCGCTGGTCAAGGCTCTGGACGCCATTGAGGCCGCCGCACCCGCGGCTCCTGTTGCGGACGGGCT
GAGCGTTGATGATGTGGAAGATCTGCGTGACTATGTAAACAAGAATTTCAGTTCGCGCCCGCGGGTGCAGATGCTCCAGA
ACGGCTACTGGACCCGGGCAGCCGCCCTGGCCCCTCGGCTGGACACAGCGGGCCGCGTCCGTCTCTTTGGCCTCATATGG
GATGAAGTGGAAGAGTTTCAGTCCGTTTATCTGCAATTATGCGATGCGCTGCACAGTCTGGGCAATCCTGCCGAGGTCAA
CTGCCCTCTTGAGGCCCTTATACCGCGTGAGCGGAGCATCATTGATGTGGAGCGGTTGCGCGGCCTCAGGCAAAGTACGG
ATGACATGCTGCCCATTCTTGCGCCCAACGATCGCACGGTCAGCCTGCCCAGGGCTGTGGTCACGGCGCTTACGGCCGAG
ATCACCATCTTCATGCGTGAAAAACCTGATGATTTTTTTGACCATACCGACTTGCTGGACTTTCCCGGTTATCGTTCGCG
TTACAAATTCACCAATCTTCGCGAAGCCCTTGCCAGCAAGGAAGACATGCTCAAGGAGCTTTTTCTGCGCGGCAAGGTGG
CATACCTTTTTGAACGCTACCGTGAAGAAAAAGAGCTGACCAGCATGCTCCTGTGCATCGCACCCGGCCCGCAGGAGGTG
CACGACCTGCCGCACGCCGTCTACGAGTGGATATGCTCCACTCACGGCGAAAAACCCTCAAGCCGTGCGGGCAAGGATCC
GGCCCTTTTTTTCGTGCTTACCAAGATGGACATGGAGTTTGAAAAAAAGAAAGGTTCGCCCTCAGTAGAAACCCGCTGGA
CGACCCGACTGGAATCATCGTTGGTAAAATTCTTCGGTCAGGTGCATGACTGGCCGGAAAACTGGGACGGTATCCATCCG
TTCAGCAATGTTTTTCTTCTGCGTAATCCCAATTTCACCTGCGAAGCCATATTTGACTATACAGGCGGGCGCGAAACAGG
AATCCGCCAGGACCAGACCGCCTTTGTAGAAGAGGTGCGCCAGGCTTTTCTGCAGTCGCCTCTGGTGCAGCGCCATGTGG
CCGGGGCGGAAAAGGTCTGGCAGGCGGCCATGACCCTCAACGACGGCGGCGTAAGCCTTCTGCGCGACAGCCTGCGCCCC
CTGTGCAATCCCGAACTTAAACGGCAGCAGATCTGTGTAAGCCTTGATGAGAAAAAAGAGCAGCTTCTGGCACGCCTTGC
CCCGTTTTACCGTACAGACGACCGTGAAGAACTGCGCCGCCAAAAAGAGCAGCTTTCACGCACCCTGGTCACCTTGCTGG
CCAAGGTTGCAGAAAAACAGCTTTTTGGTGATTTTTTACGCCGCCTGCAGGTTCGCGATTACGACCTGTATGAACTATGC
CTCAACGCCCGCCAGATGCCCGAACAGGGGCAGCCGCAGGCAAGCGTTCAGGTAGTGGGAACCCGTGTTTCGGCTGACGA
TATTCTTGGAGATATTTTCGGCGACAACACCGAAAGCACGCCTGCAGCAGCCAAGCCAAGCGAGCAGGAGCAGGAGCAGG
CCAGGGATATGGCCGGAGTCTTCACTTCGCTTGTTATGGAACACTGGATAGGCCGCCTGCGTGACCTGTCCGCTTCCGCC
GAGGCACGCAGCCAGCTTGGCCTCCCGGCACTGGAGCTTGATCAGCTGTGTCATGAGATCATCCTGGCTGCCGCACGCTG
CCGCCTGCGCGAAAACCTTGAAGAGCAGTTGCGTCGGGGTACATCGTACAGCAATATCGCTCGCGAACGCCTGGTCTGGA
AACAGGTAAGTCTGGCCGCAGACGCCATCAACGCCTTTGTTGACTGGCTGGGCTTTGACCCGCGCTTCAAGGATCAGAGC
CAGCGCACCATCCTTTTTGGCGGCAAGAGCGTCAGCCTGTTTGATCCGCCACAGCCCATCATGGGCGAACCGCGTATAGG
CGAGCAGGAAGCGCCCTATGACCGCCTCTGGTATACTGACTGGTTGCGAGCCCTGGCCTACAGCATCACGGCCAATGTGG
ACTTTGACGGCCAGCAGACTCTGGATCCGGAACAAAACAACCGCCTGCGCGACATCTTGCAGGTTTTCAAGGGATAA

Upstream 100 bases:

>100_bases
GCGCGATCTTGAAATACGCCTGCAAACACTGAAGCTGGACGAAGGCTACTGGCTGGACACCGGCATTGTGACCGATGCCG
GCTAAGCGAGGCAACTAGTT

Downstream 100 bases:

>100_bases
TCTATGCGAGCCAGCATTGCAGCGGACCCGGAGCGCGGTCCCGGATACGGCATTATTGAAATCGAGGGGGCTGGCGACAT
CCTTTCCCCTTCTTTTACCC

Product: virulence factor SrfC-like protein

Products: NA

Alternate protein names: Virulence Factor SrfC-Like Protein; Virulence Effector SrfC; Virulence Factor SrfC; Virulence Protein; Virulence Factor Protein; Protein Conserved In Bacteria Virulence Factor; Virulence Effector Protein; Type III Effector Protein; Coiled-Coil Structure; Protein Virulence Factor-Like Protein; Type III Secretion System Effector; HopL1 Protein

Number of amino acids: Translated: 878; Mature: 878

Protein sequence:

>878_residues
MVMQQDMDLARQCRQLADTAGQAGTWLQDNAGLVGGEKNALLRDMRHAIRFFGKCGQAAERKMCVGVFGPSQSGKSYLIS
ALASDANGTLLADFCGESHDFLKKINPEGGKESTGLVTRFTTSQPEGLSPEFPIRLRLLSETDVARVLANTYYADCDHQD
APAAEALVKALDAIEAAAPAAPVADGLSVDDVEDLRDYVNKNFSSRPRVQMLQNGYWTRAAALAPRLDTAGRVRLFGLIW
DEVEEFQSVYLQLCDALHSLGNPAEVNCPLEALIPRERSIIDVERLRGLRQSTDDMLPILAPNDRTVSLPRAVVTALTAE
ITIFMREKPDDFFDHTDLLDFPGYRSRYKFTNLREALASKEDMLKELFLRGKVAYLFERYREEKELTSMLLCIAPGPQEV
HDLPHAVYEWICSTHGEKPSSRAGKDPALFFVLTKMDMEFEKKKGSPSVETRWTTRLESSLVKFFGQVHDWPENWDGIHP
FSNVFLLRNPNFTCEAIFDYTGGRETGIRQDQTAFVEEVRQAFLQSPLVQRHVAGAEKVWQAAMTLNDGGVSLLRDSLRP
LCNPELKRQQICVSLDEKKEQLLARLAPFYRTDDREELRRQKEQLSRTLVTLLAKVAEKQLFGDFLRRLQVRDYDLYELC
LNARQMPEQGQPQASVQVVGTRVSADDILGDIFGDNTESTPAAAKPSEQEQEQARDMAGVFTSLVMEHWIGRLRDLSASA
EARSQLGLPALELDQLCHEIILAAARCRLRENLEEQLRRGTSYSNIARERLVWKQVSLAADAINAFVDWLGFDPRFKDQS
QRTILFGGKSVSLFDPPQPIMGEPRIGEQEAPYDRLWYTDWLRALAYSITANVDFDGQQTLDPEQNNRLRDILQVFKG

Sequences:

>Translated_878_residues
MVMQQDMDLARQCRQLADTAGQAGTWLQDNAGLVGGEKNALLRDMRHAIRFFGKCGQAAERKMCVGVFGPSQSGKSYLIS
ALASDANGTLLADFCGESHDFLKKINPEGGKESTGLVTRFTTSQPEGLSPEFPIRLRLLSETDVARVLANTYYADCDHQD
APAAEALVKALDAIEAAAPAAPVADGLSVDDVEDLRDYVNKNFSSRPRVQMLQNGYWTRAAALAPRLDTAGRVRLFGLIW
DEVEEFQSVYLQLCDALHSLGNPAEVNCPLEALIPRERSIIDVERLRGLRQSTDDMLPILAPNDRTVSLPRAVVTALTAE
ITIFMREKPDDFFDHTDLLDFPGYRSRYKFTNLREALASKEDMLKELFLRGKVAYLFERYREEKELTSMLLCIAPGPQEV
HDLPHAVYEWICSTHGEKPSSRAGKDPALFFVLTKMDMEFEKKKGSPSVETRWTTRLESSLVKFFGQVHDWPENWDGIHP
FSNVFLLRNPNFTCEAIFDYTGGRETGIRQDQTAFVEEVRQAFLQSPLVQRHVAGAEKVWQAAMTLNDGGVSLLRDSLRP
LCNPELKRQQICVSLDEKKEQLLARLAPFYRTDDREELRRQKEQLSRTLVTLLAKVAEKQLFGDFLRRLQVRDYDLYELC
LNARQMPEQGQPQASVQVVGTRVSADDILGDIFGDNTESTPAAAKPSEQEQEQARDMAGVFTSLVMEHWIGRLRDLSASA
EARSQLGLPALELDQLCHEIILAAARCRLRENLEEQLRRGTSYSNIARERLVWKQVSLAADAINAFVDWLGFDPRFKDQS
QRTILFGGKSVSLFDPPQPIMGEPRIGEQEAPYDRLWYTDWLRALAYSITANVDFDGQQTLDPEQNNRLRDILQVFKG
>Mature_878_residues
MVMQQDMDLARQCRQLADTAGQAGTWLQDNAGLVGGEKNALLRDMRHAIRFFGKCGQAAERKMCVGVFGPSQSGKSYLIS
ALASDANGTLLADFCGESHDFLKKINPEGGKESTGLVTRFTTSQPEGLSPEFPIRLRLLSETDVARVLANTYYADCDHQD
APAAEALVKALDAIEAAAPAAPVADGLSVDDVEDLRDYVNKNFSSRPRVQMLQNGYWTRAAALAPRLDTAGRVRLFGLIW
DEVEEFQSVYLQLCDALHSLGNPAEVNCPLEALIPRERSIIDVERLRGLRQSTDDMLPILAPNDRTVSLPRAVVTALTAE
ITIFMREKPDDFFDHTDLLDFPGYRSRYKFTNLREALASKEDMLKELFLRGKVAYLFERYREEKELTSMLLCIAPGPQEV
HDLPHAVYEWICSTHGEKPSSRAGKDPALFFVLTKMDMEFEKKKGSPSVETRWTTRLESSLVKFFGQVHDWPENWDGIHP
FSNVFLLRNPNFTCEAIFDYTGGRETGIRQDQTAFVEEVRQAFLQSPLVQRHVAGAEKVWQAAMTLNDGGVSLLRDSLRP
LCNPELKRQQICVSLDEKKEQLLARLAPFYRTDDREELRRQKEQLSRTLVTLLAKVAEKQLFGDFLRRLQVRDYDLYELC
LNARQMPEQGQPQASVQVVGTRVSADDILGDIFGDNTESTPAAAKPSEQEQEQARDMAGVFTSLVMEHWIGRLRDLSASA
EARSQLGLPALELDQLCHEIILAAARCRLRENLEEQLRRGTSYSNIARERLVWKQVSLAADAINAFVDWLGFDPRFKDQS
QRTILFGGKSVSLFDPPQPIMGEPRIGEQEAPYDRLWYTDWLRALAYSITANVDFDGQQTLDPEQNNRLRDILQVFKG

Specific function: Unknown

COG id: COG4458

COG function: function code S; Uncharacterized protein conserved in bacteria, putative virulence factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99055; Mature: 99055

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVMQQDMDLARQCRQLADTAGQAGTWLQDNAGLVGGEKNALLRDMRHAIRFFGKCGQAAE
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHC
RKMCVGVFGPSQSGKSYLISALASDANGTLLADFCGESHDFLKKINPEGGKESTGLVTRF
CCEEEEEECCCCCCHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHCCCCCCCCCCCEEEEE
TTSQPEGLSPEFPIRLRLLSETDVARVLANTYYADCDHQDAPAAEALVKALDAIEAAAPA
ECCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
APVADGLSVDDVEDLRDYVNKNFSSRPRVQMLQNGYWTRAAALAPRLDTAGRVRLFGLIW
CCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCEEEHHHHH
DEVEEFQSVYLQLCDALHSLGNPAEVNCPLEALIPRERSIIDVERLRGLRQSTDDMLPIL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEECHHHHHHHHHCHHCCCCEE
APNDRTVSLPRAVVTALTAEITIFMREKPDDFFDHTDLLDFPGYRSRYKFTNLREALASK
CCCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
EDMLKELFLRGKVAYLFERYREEKELTSMLLCIAPGPQEVHDLPHAVYEWICSTHGEKPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC
SRAGKDPALFFVLTKMDMEFEKKKGSPSVETRWTTRLESSLVKFFGQVHDWPENWDGIHP
CCCCCCCEEEEEEEHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
FSNVFLLRNPNFTCEAIFDYTGGRETGIRQDQTAFVEEVRQAFLQSPLVQRHVAGAEKVW
CCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCHHHHH
QAAMTLNDGGVSLLRDSLRPLCNPELKRQQICVSLDEKKEQLLARLAPFYRTDDREELRR
HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
QKEQLSRTLVTLLAKVAEKQLFGDFLRRLQVRDYDLYELCLNARQMPEQGQPQASVQVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEE
TRVSADDILGDIFGDNTESTPAAAKPSEQEQEQARDMAGVFTSLVMEHWIGRLRDLSASA
EECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EARSQLGLPALELDQLCHEIILAAARCRLRENLEEQLRRGTSYSNIARERLVWKQVSLAA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DAINAFVDWLGFDPRFKDQSQRTILFGGKSVSLFDPPQPIMGEPRIGEQEAPYDRLWYTD
HHHHHHHHHHCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
WLRALAYSITANVDFDGQQTLDPEQNNRLRDILQVFKG
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MVMQQDMDLARQCRQLADTAGQAGTWLQDNAGLVGGEKNALLRDMRHAIRFFGKCGQAAE
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHC
RKMCVGVFGPSQSGKSYLISALASDANGTLLADFCGESHDFLKKINPEGGKESTGLVTRF
CCEEEEEECCCCCCHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHCCCCCCCCCCCEEEEE
TTSQPEGLSPEFPIRLRLLSETDVARVLANTYYADCDHQDAPAAEALVKALDAIEAAAPA
ECCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCC
APVADGLSVDDVEDLRDYVNKNFSSRPRVQMLQNGYWTRAAALAPRLDTAGRVRLFGLIW
CCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHCCCCCCCCCEEEHHHHH
DEVEEFQSVYLQLCDALHSLGNPAEVNCPLEALIPRERSIIDVERLRGLRQSTDDMLPIL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCEECHHHHHHHHHCHHCCCCEE
APNDRTVSLPRAVVTALTAEITIFMREKPDDFFDHTDLLDFPGYRSRYKFTNLREALASK
CCCCCCCHHHHHHHHHHHHHHEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
EDMLKELFLRGKVAYLFERYREEKELTSMLLCIAPGPQEVHDLPHAVYEWICSTHGEKPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCC
SRAGKDPALFFVLTKMDMEFEKKKGSPSVETRWTTRLESSLVKFFGQVHDWPENWDGIHP
CCCCCCCEEEEEEEHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
FSNVFLLRNPNFTCEAIFDYTGGRETGIRQDQTAFVEEVRQAFLQSPLVQRHVAGAEKVW
CCCEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHCCHHHHH
QAAMTLNDGGVSLLRDSLRPLCNPELKRQQICVSLDEKKEQLLARLAPFYRTDDREELRR
HHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
QKEQLSRTLVTLLAKVAEKQLFGDFLRRLQVRDYDLYELCLNARQMPEQGQPQASVQVVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEEEE
TRVSADDILGDIFGDNTESTPAAAKPSEQEQEQARDMAGVFTSLVMEHWIGRLRDLSASA
EECCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EARSQLGLPALELDQLCHEIILAAARCRLRENLEEQLRRGTSYSNIARERLVWKQVSLAA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
DAINAFVDWLGFDPRFKDQSQRTILFGGKSVSLFDPPQPIMGEPRIGEQEAPYDRLWYTD
HHHHHHHHHHCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
WLRALAYSITANVDFDGQQTLDPEQNNRLRDILQVFKG
HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA