Click here to switch to the map view.

The map label for this gene is 220904558

Identifier: 220904558

GI number: 220904558

Start: 1519686

End: 1520264

Strand: Direct

Name: 220904558

Synonym: Ddes_1289

Alternate gene names: NA

Gene position: 1519686-1520264 (Clockwise)

Preceding gene: 220904557

Following gene: 220904559

Centisome position: 52.89

GC content: 50.78

Gene sequence:

>579_bases
ATGATGAATAAAAGCAAAAAAGAAGCGTTGCTCCAGGCGGCCAAGGATCTGTTTGGCGAGTGTGGCTATGTAGAAACCAC
TTTCAAAAAGATTTCCGACAGGGCAGGGGTCGCGCTAGGCCTGCTGACCCACCATTACGGCAACAAGGAAAAGCTTTTTC
TGGCATCCGGCCTTGATGTGCTGGAGCATTTTCTGCAAAAGCTGCGTCAGGCCACTGCCGATGCCGATTCAGGCTTTGAC
GGCGTCATGCGTTTTTGCAAGGCATATCTTGATTTTTCCATTGACAAGGATTCCAACTGGCTGGTGCTTGTACGATGTTC
GCCGTACAGCGACATGAAAACCAAGACAGACCGTGACACTATGGATTCCATGTTTTCACAGGTGCATCAGGAGCTGGAAA
AAGTCATTTCCCGCGGCATCGAAGACGGCAGCCTGGTTACGGTGGACAGCAAGTCCACAGCTCAGGTGATTATTTCACTT
ATGGTAGGCGCCAACCGCACACGGGTTCTCACTCCGTATGCCGCGCCGACATTGTACAAAGATGTACTGGACTTTGTAGC
CCGTTCCATAAAGGCCTGA

Upstream 100 bases:

>100_bases
CACAAGGCACTGCAGTATTGACTTTACATGTTTTTACAGATAATACATTTAACTATAAGTAAGTAATCAAAGGACTATCC
AACCTGTTCCTGCGAAGATC

Downstream 100 bases:

>100_bases
GGTATTTTTGCGCAGCCCTGCGGCCTGCTCTGTTGACAGCAAAGTAAAGAACAGATAAGCAAAACGTATGAAGCTAACAA
CCGCCATCTGCTATTTTCGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Regulatory Protein TetR; Transcription Regulator

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MMNKSKKEALLQAAKDLFGECGYVETTFKKISDRAGVALGLLTHHYGNKEKLFLASGLDVLEHFLQKLRQATADADSGFD
GVMRFCKAYLDFSIDKDSNWLVLVRCSPYSDMKTKTDRDTMDSMFSQVHQELEKVISRGIEDGSLVTVDSKSTAQVIISL
MVGANRTRVLTPYAAPTLYKDVLDFVARSIKA

Sequences:

>Translated_192_residues
MMNKSKKEALLQAAKDLFGECGYVETTFKKISDRAGVALGLLTHHYGNKEKLFLASGLDVLEHFLQKLRQATADADSGFD
GVMRFCKAYLDFSIDKDSNWLVLVRCSPYSDMKTKTDRDTMDSMFSQVHQELEKVISRGIEDGSLVTVDSKSTAQVIISL
MVGANRTRVLTPYAAPTLYKDVLDFVARSIKA
>Mature_192_residues
MMNKSKKEALLQAAKDLFGECGYVETTFKKISDRAGVALGLLTHHYGNKEKLFLASGLDVLEHFLQKLRQATADADSGFD
GVMRFCKAYLDFSIDKDSNWLVLVRCSPYSDMKTKTDRDTMDSMFSQVHQELEKVISRGIEDGSLVTVDSKSTAQVIISL
MVGANRTRVLTPYAAPTLYKDVLDFVARSIKA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21402; Mature: 21402

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNKSKKEALLQAAKDLFGECGYVETTFKKISDRAGVALGLLTHHYGNKEKLFLASGLDV
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHCHHH
LEHFLQKLRQATADADSGFDGVMRFCKAYLDFSIDKDSNWLVLVRCSPYSDMKTKTDRDT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
MDSMFSQVHQELEKVISRGIEDGSLVTVDSKSTAQVIISLMVGANRTRVLTPYAAPTLYK
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEECCCCCHHHHH
DVLDFVARSIKA
HHHHHHHHHHCC
>Mature Secondary Structure
MMNKSKKEALLQAAKDLFGECGYVETTFKKISDRAGVALGLLTHHYGNKEKLFLASGLDV
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHCHHH
LEHFLQKLRQATADADSGFDGVMRFCKAYLDFSIDKDSNWLVLVRCSPYSDMKTKTDRDT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
MDSMFSQVHQELEKVISRGIEDGSLVTVDSKSTAQVIISLMVGANRTRVLTPYAAPTLYK
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEECCCCCHHHHH
DVLDFVARSIKA
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA