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The map label for this gene is lcrS [H]

Identifier: 220904532

GI number: 220904532

Start: 1486454

End: 1486720

Strand: Reverse

Name: lcrS [H]

Synonym: Ddes_1263

Alternate gene names: 220904532

Gene position: 1486720-1486454 (Counterclockwise)

Preceding gene: 220904535

Following gene: 220904531

Centisome position: 51.74

GC content: 52.06

Gene sequence:

>267_bases
ATGCAGAAATCTCGATTCACGGAAAGTCAGATCATTCGGATTCTGAAGGAAGCTGAAGGTGGGCGCACGGTAGCCGATGT
CTGCCGAGAATACGGTGTAAGCCAGGCCACGTGCTACAAATGGAAATCCAAGTATGGGGGCATGGAGGCTGCGGACATCA
AACGCCTCAAGGAGCTTGAGGAGGAGAACCGCAAGCTCAAGCGCATGTTTGCCAACCTCAGCCTTGAGCACGAGGTCTTG
AAGGACATCATAGCAAAAAAGCTCTGA

Upstream 100 bases:

>100_bases
TTGAATCCGCCAGGCGGGAGACGTCAAGATGTAACCTTCCCCTAAAATAGGACCAGCGCATGGTAGAGATTTCTGGCAAA
CTGCCCTCAAGGAGACGGCA

Downstream 100 bases:

>100_bases
GGCCAACCGAGAAGCGGGAGATCGTCGACTACGCTCGCGATGAGTTCGGGCTGAGCGTGCGTAAGGCATGCGCCATAGTG
CTCATCAGTCGGACGCTATA

Product: transposase IS3/IS911 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MQKSRFTESQIIRILKEAEGGRTVADVCREYGVSQATCYKWKSKYGGMEAADIKRLKELEEENRKLKRMFANLSLEHEVL
KDIIAKKL

Sequences:

>Translated_88_residues
MQKSRFTESQIIRILKEAEGGRTVADVCREYGVSQATCYKWKSKYGGMEAADIKRLKELEEENRKLKRMFANLSLEHEVL
KDIIAKKL
>Mature_88_residues
MQKSRFTESQIIRILKEAEGGRTVADVCREYGVSQATCYKWKSKYGGMEAADIKRLKELEEENRKLKRMFANLSLEHEVL
KDIIAKKL

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002514 [H]

Pfam domain/function: PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 10237; Mature: 10237

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSRFTESQIIRILKEAEGGRTVADVCREYGVSQATCYKWKSKYGGMEAADIKRLKELE
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
EENRKLKRMFANLSLEHEVLKDIIAKKL
HHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MQKSRFTESQIIRILKEAEGGRTVADVCREYGVSQATCYKWKSKYGGMEAADIKRLKELE
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
EENRKLKRMFANLSLEHEVLKDIIAKKL
HHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9746557; 9748454; 11586360 [H]