Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220904526
Identifier: 220904526
GI number: 220904526
Start: 1476401
End: 1478176
Strand: Direct
Name: 220904526
Synonym: Ddes_1257
Alternate gene names: NA
Gene position: 1476401-1478176 (Clockwise)
Preceding gene: 220904525
Following gene: 220904527
Centisome position: 51.38
GC content: 55.57
Gene sequence:
>1776_bases ATGACTCAGACACAACAGCCCGTCTTTCAAGCCGTCTTTTCTACAAAAACAGATTCCGGAAATGATGTCGCGCCGATTCT TTGCGACATTGAAGCCAGAATCAACGGTCGCCGCTTTGCCATGCTGGCCCCCGGCGGACCGGAAAGAGAAAAGGCGGTCA TTACGGCTCTGCACAGCGACCAGTTAAACAGTTCCCTTCCTGTTCTTCTCGGTTGCGGCATGGGATACGCCTTGCGCCTT TTGCTGCAACGCTGCCCCGGGCCGATGGCTGTAGTGGAAAAAGAGCAGGAACTGCAGAAGATCAGTGGGGTTCTTGCAGG CTTGCCTGCTGAAGAACGTCAACGTATTCACCTGATCTTCGCAAAAGAAGCGGATGAAACCCTGAGACAGCTGACCCGCT GGCAGATGCGCCACAGTGGACTGCGCCTGCTGCCTGTGGCCCTGCCCTTTTATCTGCGGCTTGACCGTGCCTATTACGGC TCCCTGCAAAAAGAACTTATAGCCAGCACCCGCTTCGACTTCTGGGGTCGTGCCGCCGGCCCCCGCTTCACGGGTGGCCA ACCGCGCGTCCTTCTGCTTACAAGCAAATATTTTCTTATGGGCGAACTGGAAGGAGCTTGCCGTAAACTCGGCATTGAAC ACAGGCTGGTTCGTATCGAAGATAATAGCGTTGCCTGTACAGATTTTGTGGAACAGCTGCTTGAGGCTGTTATTTCCTTC CGGCCGGACTGCTGCATAACGCTTAACCATATGGGCGTTGATGTGGAAGGCATCCTCATGGATCTTCTCGCACAGCTGCA ATTGCCTCTGGCCTCTTGGTTTGTGGACAATCCCCACCTCATTATCCATCTCTATTCACGTTGCATCAGCCCCTGGACAG CCCTGTTCACCTGGGATGCGGACAATATTGAAAGCCTGCGTGACACAGGCTTCAAACATGTTTTTTATCTGCCCCTCGGT ACGGACCCCGACCGTTTTCACCCCGGGCGCGGTGCAGAAGCCCCAGATTCGTGGCAGGCTGACATTTCTTTTGTGGGCAA TTCCATGCTGTACAAAGTGGGCGGCCGCCTGAAGCACGGTCGTTTCCCCCGCCAGTTGCTGCTGCCTTTTCTTGAGGTAT CCCACGCCTTCATGAAAAGCGACCAGCGCTCTGTAGCAGATTTTCTGCACGATTCTTTCCCTGCCGTTTTTGCACACTAT CAGGCCCTGCCCGACAATGAGGCACGACTGGCCTACGAGACCGCCATTACATGGCAAGCCACACGCCTGTACCGTAATGG TTGTGTGCGCCGCCTGCTGCCCCTGCACCCGCTTATTGTGGGCGACAACGGCTGGCGGTCCGAATTCAGGCGCGAAGTTG TTCAGCCGCGCTATATGGACGCCCTGAGTTATTATACGGATTTGCCACGTTTTTATTGTCGCTCGAACATTAACTTCAAC TGTACCAGCAAGCAGATGAAGGGAGCAGTAAACCAGAGAGTCTTCGATGTTCCCGCAGCCGGAGCCTTTGTGCTGACCGA CTGGCGGCGACAGATGGAACAATTGTTCGATCCGGACGAAATGGTCTGCTACCGCGACCCGGATGAAGCTCCGGAACTGG CTCGTTATTATCTGGCCCATCCGCAAAAGCGCCGCCACATAGCCCAGCGGGCCAGGCGGCGTGTGCTGGCCTGCCATACC TGGGCCCACAGGCTGCAGAGCCTGCTTGAACAGATGCGCCAGGTCTATGGAACACCCGTGACAAAAAAAATCGCAGAGCG CGGACCAGACGCATGA
Upstream 100 bases:
>100_bases TCCTGACCATCGACCGTGTTTATGAAAAAATTACATGCCGCCTGGTGGAACACGATATAGTTATTGAGCACATGCAGCAC TCGCATCTGGGCACTTCTCG
Downstream 100 bases:
>100_bases GCGCGGACCCTGTTCTGGTTCTCCAGATGCACCGCATGGGAGACCTGATTCTCACCATGCCCCTGCTTCGCCTTCTTCTA CGCCACTGGGCCGGACACGA
Product: CgeB family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 590
Protein sequence:
>591_residues MTQTQQPVFQAVFSTKTDSGNDVAPILCDIEARINGRRFAMLAPGGPEREKAVITALHSDQLNSSLPVLLGCGMGYALRL LLQRCPGPMAVVEKEQELQKISGVLAGLPAEERQRIHLIFAKEADETLRQLTRWQMRHSGLRLLPVALPFYLRLDRAYYG SLQKELIASTRFDFWGRAAGPRFTGGQPRVLLLTSKYFLMGELEGACRKLGIEHRLVRIEDNSVACTDFVEQLLEAVISF RPDCCITLNHMGVDVEGILMDLLAQLQLPLASWFVDNPHLIIHLYSRCISPWTALFTWDADNIESLRDTGFKHVFYLPLG TDPDRFHPGRGAEAPDSWQADISFVGNSMLYKVGGRLKHGRFPRQLLLPFLEVSHAFMKSDQRSVADFLHDSFPAVFAHY QALPDNEARLAYETAITWQATRLYRNGCVRRLLPLHPLIVGDNGWRSEFRREVVQPRYMDALSYYTDLPRFYCRSNINFN CTSKQMKGAVNQRVFDVPAAGAFVLTDWRRQMEQLFDPDEMVCYRDPDEAPELARYYLAHPQKRRHIAQRARRRVLACHT WAHRLQSLLEQMRQVYGTPVTKKIAERGPDA
Sequences:
>Translated_591_residues MTQTQQPVFQAVFSTKTDSGNDVAPILCDIEARINGRRFAMLAPGGPEREKAVITALHSDQLNSSLPVLLGCGMGYALRL LLQRCPGPMAVVEKEQELQKISGVLAGLPAEERQRIHLIFAKEADETLRQLTRWQMRHSGLRLLPVALPFYLRLDRAYYG SLQKELIASTRFDFWGRAAGPRFTGGQPRVLLLTSKYFLMGELEGACRKLGIEHRLVRIEDNSVACTDFVEQLLEAVISF RPDCCITLNHMGVDVEGILMDLLAQLQLPLASWFVDNPHLIIHLYSRCISPWTALFTWDADNIESLRDTGFKHVFYLPLG TDPDRFHPGRGAEAPDSWQADISFVGNSMLYKVGGRLKHGRFPRQLLLPFLEVSHAFMKSDQRSVADFLHDSFPAVFAHY QALPDNEARLAYETAITWQATRLYRNGCVRRLLPLHPLIVGDNGWRSEFRREVVQPRYMDALSYYTDLPRFYCRSNINFN CTSKQMKGAVNQRVFDVPAAGAFVLTDWRRQMEQLFDPDEMVCYRDPDEAPELARYYLAHPQKRRHIAQRARRRVLACHT WAHRLQSLLEQMRQVYGTPVTKKIAERGPDA >Mature_590_residues TQTQQPVFQAVFSTKTDSGNDVAPILCDIEARINGRRFAMLAPGGPEREKAVITALHSDQLNSSLPVLLGCGMGYALRLL LQRCPGPMAVVEKEQELQKISGVLAGLPAEERQRIHLIFAKEADETLRQLTRWQMRHSGLRLLPVALPFYLRLDRAYYGS LQKELIASTRFDFWGRAAGPRFTGGQPRVLLLTSKYFLMGELEGACRKLGIEHRLVRIEDNSVACTDFVEQLLEAVISFR PDCCITLNHMGVDVEGILMDLLAQLQLPLASWFVDNPHLIIHLYSRCISPWTALFTWDADNIESLRDTGFKHVFYLPLGT DPDRFHPGRGAEAPDSWQADISFVGNSMLYKVGGRLKHGRFPRQLLLPFLEVSHAFMKSDQRSVADFLHDSFPAVFAHYQ ALPDNEARLAYETAITWQATRLYRNGCVRRLLPLHPLIVGDNGWRSEFRREVVQPRYMDALSYYTDLPRFYCRSNINFNC TSKQMKGAVNQRVFDVPAAGAFVLTDWRRQMEQLFDPDEMVCYRDPDEAPELARYYLAHPQKRRHIAQRARRRVLACHTW AHRLQSLLEQMRQVYGTPVTKKIAERGPDA
Specific function: Unknown
COG id: COG4641
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67546; Mature: 67414
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00636 DNAJ_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTQQPVFQAVFSTKTDSGNDVAPILCDIEARINGRRFAMLAPGGPEREKAVITALHSD CCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCCHHHEEEEHHH QLNSSLPVLLGCGMGYALRLLLQRCPGPMAVVEKEQELQKISGVLAGLPAEERQRIHLIF CCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEE AKEADETLRQLTRWQMRHSGLRLLPVALPFYLRLDRAYYGSLQKELIASTRFDFWGRAAG ECCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PRFTGGQPRVLLLTSKYFLMGELEGACRKLGIEHRLVRIEDNSVACTDFVEQLLEAVISF CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCEEHHHHHHHHHHHHHHC RPDCCITLNHMGVDVEGILMDLLAQLQLPLASWFVDNPHLIIHLYSRCISPWTALFTWDA CCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCHHEEEEECC DNIESLRDTGFKHVFYLPLGTDPDRFHPGRGAEAPDSWQADISFVGNSMLYKVGGRLKHG HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCCCC RFPRQLLLPFLEVSHAFMKSDQRSVADFLHDSFPAVFAHYQALPDNEARLAYETAITWQA CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEHHHHHHH TRLYRNGCVRRLLPLHPLIVGDNGWRSEFRREVVQPRYMDALSYYTDLPRFYCRSNINFN HHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHCCCCEE CTSKQMKGAVNQRVFDVPAAGAFVLTDWRRQMEQLFDPDEMVCYRDPDEAPELARYYLAH ECHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHC PQKRRHIAQRARRRVLACHTWAHRLQSLLEQMRQVYGTPVTKKIAERGPDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC >Mature Secondary Structure TQTQQPVFQAVFSTKTDSGNDVAPILCDIEARINGRRFAMLAPGGPEREKAVITALHSD CCCHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCEEEEECCCCCCCCHHHEEEEHHH QLNSSLPVLLGCGMGYALRLLLQRCPGPMAVVEKEQELQKISGVLAGLPAEERQRIHLIF CCCCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEE AKEADETLRQLTRWQMRHSGLRLLPVALPFYLRLDRAYYGSLQKELIASTRFDFWGRAAG ECCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PRFTGGQPRVLLLTSKYFLMGELEGACRKLGIEHRLVRIEDNSVACTDFVEQLLEAVISF CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEECCCEEHHHHHHHHHHHHHHC RPDCCITLNHMGVDVEGILMDLLAQLQLPLASWFVDNPHLIIHLYSRCISPWTALFTWDA CCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHCCCHHEEEEECC DNIESLRDTGFKHVFYLPLGTDPDRFHPGRGAEAPDSWQADISFVGNSMLYKVGGRLKHG HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCCCC RFPRQLLLPFLEVSHAFMKSDQRSVADFLHDSFPAVFAHYQALPDNEARLAYETAITWQA CCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEEEEHHHHHHH TRLYRNGCVRRLLPLHPLIVGDNGWRSEFRREVVQPRYMDALSYYTDLPRFYCRSNINFN HHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHCCCCEE CTSKQMKGAVNQRVFDVPAAGAFVLTDWRRQMEQLFDPDEMVCYRDPDEAPELARYYLAH ECHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHC PQKRRHIAQRARRRVLACHTWAHRLQSLLEQMRQVYGTPVTKKIAERGPDA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA