| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904497
Identifier: 220904497
GI number: 220904497
Start: 1441060
End: 1441890
Strand: Reverse
Name: 220904497
Synonym: Ddes_1228
Alternate gene names: NA
Gene position: 1441890-1441060 (Counterclockwise)
Preceding gene: 220904498
Following gene: 220904496
Centisome position: 50.18
GC content: 43.32
Gene sequence:
>831_bases ATGATTAATCTCACCAGTGCTTTTGCCTATCAAAACATCGCCGTACATCCTGATGAACTTATGCCTATTGCTGAACTTAT GCTGCGTTGGGCATGGAATACGGACGATAAAATCAAGTCTCAGCTGTATTCACCTCTAAAAGGAGAAGAGTTTCAAAAAA AACTGACCTTGTATGAACTCAAGGATGTATTGTTTCAGCAAAATGAACGTTCATTAAAAGAATACAATGGGTCTATTCTG ACATTACAAGCTATAATTGTTCCAAAAAACTGTAGTTATGATGAATATATTGGCAAATTTACAGATATTTTTGTTTGCAG ACAAGATGTGATGAACATAGAAGAAAAGTTTGGACATAGGGATTACTGTGCGCTGCCTCCCGGAATTGCATCCAAAATGA TGGGCAGAGAAGACGTATGTACCACTAAAAATATACATGTCATGGGGCCTGCCGTTTTCCGCAAGATATTTTCCTCAAAG CACTGGCAAAACGCCTCAGACGAAACGCAGACAGTTACGCCTCTTCCCAAAACGCATGTTTGGCCGTGGCTTGGCCCTAT CAATCCGCCGCTTTCCCACGAAGTCATCCGCCGCACTGTTCGGGATGATCAGGAAGAAATCAGCGATTTTGTAAAAGCTG CCAAAGAATTGGGGCAGAGGAACCCCTATTGTTTGGCAAAAATGGTCAAACATCGCTATCCTGAAACTTCATACCCTTTG CTTGTTGATGTGATAGACCCCGATCACAGCCGAAATCCAAAGGCTGCGCGACAAATGGGCCGCAGATGGTTGACAGAGGA TGCAGAATGTCACGCAGAAGCCGTCTGTTGA
Upstream 100 bases:
>100_bases ATAACCGCGCTGAGTATATGAAGGAACGCCGCAACCTCATGCAAGCGTGGGCTGATTACTTAGAAGATTTAAAGATGCAG TCAATGCAGCCGGGGCAAAT
Downstream 100 bases:
>100_bases ACAAAATACCTCCCATTTTGTAAGGCTTTGGCATATTGACCGTAGAGGTCGCCCCTGTGGCATGTTTGACCCGTGTTGTA TCAGCACGGTTTTTTTCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MINLTSAFAYQNIAVHPDELMPIAELMLRWAWNTDDKIKSQLYSPLKGEEFQKKLTLYELKDVLFQQNERSLKEYNGSIL TLQAIIVPKNCSYDEYIGKFTDIFVCRQDVMNIEEKFGHRDYCALPPGIASKMMGREDVCTTKNIHVMGPAVFRKIFSSK HWQNASDETQTVTPLPKTHVWPWLGPINPPLSHEVIRRTVRDDQEEISDFVKAAKELGQRNPYCLAKMVKHRYPETSYPL LVDVIDPDHSRNPKAARQMGRRWLTEDAECHAEAVC
Sequences:
>Translated_276_residues MINLTSAFAYQNIAVHPDELMPIAELMLRWAWNTDDKIKSQLYSPLKGEEFQKKLTLYELKDVLFQQNERSLKEYNGSIL TLQAIIVPKNCSYDEYIGKFTDIFVCRQDVMNIEEKFGHRDYCALPPGIASKMMGREDVCTTKNIHVMGPAVFRKIFSSK HWQNASDETQTVTPLPKTHVWPWLGPINPPLSHEVIRRTVRDDQEEISDFVKAAKELGQRNPYCLAKMVKHRYPETSYPL LVDVIDPDHSRNPKAARQMGRRWLTEDAECHAEAVC >Mature_276_residues MINLTSAFAYQNIAVHPDELMPIAELMLRWAWNTDDKIKSQLYSPLKGEEFQKKLTLYELKDVLFQQNERSLKEYNGSIL TLQAIIVPKNCSYDEYIGKFTDIFVCRQDVMNIEEKFGHRDYCALPPGIASKMMGREDVCTTKNIHVMGPAVFRKIFSSK HWQNASDETQTVTPLPKTHVWPWLGPINPPLSHEVIRRTVRDDQEEISDFVKAAKELGQRNPYCLAKMVKHRYPETSYPL LVDVIDPDHSRNPKAARQMGRRWLTEDAECHAEAVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31912; Mature: 31912
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLTSAFAYQNIAVHPDELMPIAELMLRWAWNTDDKIKSQLYSPLKGEEFQKKLTLYEL CCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH KDVLFQQNERSLKEYNGSILTLQAIIVPKNCSYDEYIGKFTDIFVCRQDVMNIEEKFGHR HHHHHHCCHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC DYCALPPGIASKMMGREDVCTTKNIHVMGPAVFRKIFSSKHWQNASDETQTVTPLPKTHV CCCCCCCCHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCEECCCCCCCC WPWLGPINPPLSHEVIRRTVRDDQEEISDFVKAAKELGQRNPYCLAKMVKHRYPETSYPL CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCE LVDVIDPDHSRNPKAARQMGRRWLTEDAECHAEAVC EEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure MINLTSAFAYQNIAVHPDELMPIAELMLRWAWNTDDKIKSQLYSPLKGEEFQKKLTLYEL CCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH KDVLFQQNERSLKEYNGSILTLQAIIVPKNCSYDEYIGKFTDIFVCRQDVMNIEEKFGHR HHHHHHCCHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC DYCALPPGIASKMMGREDVCTTKNIHVMGPAVFRKIFSSKHWQNASDETQTVTPLPKTHV CCCCCCCCHHHHHCCCCCCCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCEECCCCCCCC WPWLGPINPPLSHEVIRRTVRDDQEEISDFVKAAKELGQRNPYCLAKMVKHRYPETSYPL CCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCE LVDVIDPDHSRNPKAARQMGRRWLTEDAECHAEAVC EEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA