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The map label for this gene is 220904493

Identifier: 220904493

GI number: 220904493

Start: 1438399

End: 1438683

Strand: Direct

Name: 220904493

Synonym: Ddes_1224

Alternate gene names: NA

Gene position: 1438399-1438683 (Clockwise)

Preceding gene: 220904491

Following gene: 220904502

Centisome position: 50.06

GC content: 54.74

Gene sequence:

>285_bases
ATGGATAAAATTCCCAATTTGAACTGGGCGCTTGCCAAAGTGGTGAAAGAAGCCCGTGAAACCGCCGGGTTAACGCAAAA
CGAACTGGCCGGATTCTCCGGGCTTTCGGAAATTTACCTTTCCAGTCTGGAGCGTGGCCAGCGCGGTGACTCCCTCAATG
CCCTGATGCAGATTGCCGGGGTACTGAAGCTTGAGGCTTCCGAGTTGGTGCGCAGGGTTGAGACGGAATTAAAGAATAAT
CCCCAGCCGCCCGACATAAAAACCGGACGCCCCCGCAAGGCATAG

Upstream 100 bases:

>100_bases
CATACACTCCTTTGGTTTCAGTAGGGCAGCATTTGTGTAACACAAACAAATTATACGTTCGTATAGCTTATTGCGTCAAG
TTGTCCGCTACATAGGAGGT

Downstream 100 bases:

>100_bases
ACTGTAAGCGTGTAATTCTGTAATCACCCTGAAAATATTAGCTATTACAATTACAAAAGATAAAATAAAATGTAATCCTG
TAAACGTGATACAAAGCAGC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MDKIPNLNWALAKVVKEARETAGLTQNELAGFSGLSEIYLSSLERGQRGDSLNALMQIAGVLKLEASELVRRVETELKNN
PQPPDIKTGRPRKA

Sequences:

>Translated_94_residues
MDKIPNLNWALAKVVKEARETAGLTQNELAGFSGLSEIYLSSLERGQRGDSLNALMQIAGVLKLEASELVRRVETELKNN
PQPPDIKTGRPRKA
>Mature_94_residues
MDKIPNLNWALAKVVKEARETAGLTQNELAGFSGLSEIYLSSLERGQRGDSLNALMQIAGVLKLEASELVRRVETELKNN
PQPPDIKTGRPRKA

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10343; Mature: 10343

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKIPNLNWALAKVVKEARETAGLTQNELAGFSGLSEIYLSSLERGQRGDSLNALMQIAG
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
VLKLEASELVRRVETELKNNPQPPDIKTGRPRKA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDKIPNLNWALAKVVKEARETAGLTQNELAGFSGLSEIYLSSLERGQRGDSLNALMQIAG
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
VLKLEASELVRRVETELKNNPQPPDIKTGRPRKA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA