| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904489
Identifier: 220904489
GI number: 220904489
Start: 1433575
End: 1435896
Strand: Reverse
Name: 220904489
Synonym: Ddes_1219
Alternate gene names: NA
Gene position: 1435896-1433575 (Counterclockwise)
Preceding gene: 220904492
Following gene: 220904481
Centisome position: 49.97
GC content: 33.55
Gene sequence:
>2322_bases ATGAATGAATACGATTTTACAAACCTGAACCCGAATGAGTTTGAAACGCTAGCCAATGACCTGCTAAGCAGGCTATATAA TCTACACATAGAAAGTTTTAAACCGGGTAAAGACTTAGGCATTGATGGGCGATTTTTTCGTTTTGAAAATAGCCCTGCAA CAATTATTCAATGCAAGCACTATGCATTATCTGGATTCACTAAGCTTTTATATGACTTAACGAATACGGAAATACCTAAG ATAAAAAAACTATCACCAGAAAAGTACATCGTTACAACATCCGTACCACTGTCTCCACAGGAGAAAGAAAAAATAAAAGA GAATATGTTCCCGTTTATTGTGAACACTTCAGATATTTTTGGAAAAGAGGATCTAAACTCTCTGTTAAGGCAGTTTCCCG AAGTAGAGAAAACACATTATAAATTATGGATTGCAAGTTCAGCAGTCTTATCACAATTTTTGAATGCTAAAATTTATAAT GCGAGTCAAAGTGTTATTGCTGATGCTTACGATAAATGTGCTAATTATGTAGTTACCAGTAGCCATTCACAAGCTAAAGA GAAAATTAACACGACAAATGTGTTGGTTATTACTGGAGACCCAGGAGTCGGGAAGACGACATTGGCAGAACAGTTGTGCC TTGAATTTGTTGCAGATGGATATGAATTTTTTGCAATTACAAATGATATTGAAGATGGCTTTGCAGTACTAACTAGAGAA AGCAAACAAATTTTTTACTTCGATGATTTTCTTGGTAAAAACTACATTGAAACACTTCGTTTCAATGAGGACTCGAGAAT TATGCAATTTATCAATACAGTTGCAAAATCAAAACACAAAAAATTCATTCTTACGTCTCGCACAAACATCCTTGACCAAG GATACAGAGTTGGTCCTTCTTTTGCTAATGGAAACATAAAAAACAAAGAATATCTCATTGATGTTTCGCAATATAATCAC ATAGACAAAGCCAAAATACTCTATAGCTTCCTATGGAGAAGTGACCTCACCAAGGATTTTCTTGAACAAATTATTGCAAG GCAAGAATATGTAAACATAATATATCACAGAAACTACAATCCTCGCCTATTAGAATTTATTACCTCAAGTGAGCATGTTG ATTTATCAACTCACAATTTATATTTACAATTTATTGAAAATGCACTTAAAAACCCAGCAGGTATATGGGAACACCCGTAT AATGCTCAGCTAGATGATGCATCACGTGCAGTTGTTGACTTAATTACTTTTGGAAATGGCAATGTAGCAGGTGACTCATT AAGAAAGGCATATTATAATTTTCAAAATAGCGGTTTAAAGAATAATAAAACACATCTTGCGAATGACTTTGATTCAGTCA TGTCCATTCTTTCCCGTTCTTTTATTAAAAGAACATGCGCATTGGAAGCAACACACCAAACATTAAAATATAATCAAAAA GATAAAATAAAATTTTCTCTTTTTAACCCATCTATTTCTGACTATGTACTTTCGCGCTATAATACTGATTATTGGCATAT TGCAGACATGATTATGCTTTATGAAGATGATGATGGAGTAATATTTCTTGAAAATGCTGTATTACACAACAAAGAATTAG TAAAAAATGTTGCAAAAATAATTTGTGACAGAAAAAAAGACGATGCTATTTTTTGCAACAGTACCAATTACCTTCGCATA GGAAATCTTCTCGACTCAGAAGATTTTAATCTTTTATTTAAAAAATATGAATTGTCTCAAGTTTGCAAGTGTATAGAAGA AAACAAAGTTATAAACGAAGAGTTATTAAACTTTTGCAATAAGATACTCACATTACAAAGCATAAATTGCTCAGAACAAT ATGTTGCCAACTTAATATTTGCTGCCTTAGAATGTGACATGGAATATTATGATATTATCAATATGTCATCTATACTTGAA GCTCATCTGCCAGAAAACTTCCATGACGAGATTGTTGAGAAATACTACTCTAAGCTACTTGATGCATGGAAATATCTAAG ATTAGAAGAGTTCGCAGCTGACAACGTAGAAAAATTTACAACAAAGTCTTATGTGCAATATGAGGATGACTGCGACATTG AGTTTACAATTGATGAGGACAAGCTCGCTTCCCTTATCGCTGAGGATACGGCTGATCTCTACACTCCGATAGATATCTCT GATGTCAAAGATCTTCTTTATTATATCGATCTAGAGTCAATTGTCTCAGATTATTATTGTCAAGCATCTGACGATGAAAG TGGTGGCGGTGGAGGCTACTCCTCAGGGAAACAAGATATTCATGGTATTTTTGAAGGATTTTTAACAGCAAAATTTGGAT AA
Upstream 100 bases:
>100_bases ATTCCCGGCGGAGCCGGGCGAACGGACATTTTCAGGATGAAAATGTGGAGTGAGTCCACATTTCCACCTTTAGCATAAAA CGCATCCAAAGAGACCGCTG
Downstream 100 bases:
>100_bases AATATATTTATGTACTCAGATAAATCAAAACAAACTGCACAAACAGTATGCGGGCCTTATAAACTTAGGAAATTGCATAA GTAATAAAACAGGTACAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 773; Mature: 773
Protein sequence:
>773_residues MNEYDFTNLNPNEFETLANDLLSRLYNLHIESFKPGKDLGIDGRFFRFENSPATIIQCKHYALSGFTKLLYDLTNTEIPK IKKLSPEKYIVTTSVPLSPQEKEKIKENMFPFIVNTSDIFGKEDLNSLLRQFPEVEKTHYKLWIASSAVLSQFLNAKIYN ASQSVIADAYDKCANYVVTSSHSQAKEKINTTNVLVITGDPGVGKTTLAEQLCLEFVADGYEFFAITNDIEDGFAVLTRE SKQIFYFDDFLGKNYIETLRFNEDSRIMQFINTVAKSKHKKFILTSRTNILDQGYRVGPSFANGNIKNKEYLIDVSQYNH IDKAKILYSFLWRSDLTKDFLEQIIARQEYVNIIYHRNYNPRLLEFITSSEHVDLSTHNLYLQFIENALKNPAGIWEHPY NAQLDDASRAVVDLITFGNGNVAGDSLRKAYYNFQNSGLKNNKTHLANDFDSVMSILSRSFIKRTCALEATHQTLKYNQK DKIKFSLFNPSISDYVLSRYNTDYWHIADMIMLYEDDDGVIFLENAVLHNKELVKNVAKIICDRKKDDAIFCNSTNYLRI GNLLDSEDFNLLFKKYELSQVCKCIEENKVINEELLNFCNKILTLQSINCSEQYVANLIFAALECDMEYYDIINMSSILE AHLPENFHDEIVEKYYSKLLDAWKYLRLEEFAADNVEKFTTKSYVQYEDDCDIEFTIDEDKLASLIAEDTADLYTPIDIS DVKDLLYYIDLESIVSDYYCQASDDESGGGGGYSSGKQDIHGIFEGFLTAKFG
Sequences:
>Translated_773_residues MNEYDFTNLNPNEFETLANDLLSRLYNLHIESFKPGKDLGIDGRFFRFENSPATIIQCKHYALSGFTKLLYDLTNTEIPK IKKLSPEKYIVTTSVPLSPQEKEKIKENMFPFIVNTSDIFGKEDLNSLLRQFPEVEKTHYKLWIASSAVLSQFLNAKIYN ASQSVIADAYDKCANYVVTSSHSQAKEKINTTNVLVITGDPGVGKTTLAEQLCLEFVADGYEFFAITNDIEDGFAVLTRE SKQIFYFDDFLGKNYIETLRFNEDSRIMQFINTVAKSKHKKFILTSRTNILDQGYRVGPSFANGNIKNKEYLIDVSQYNH IDKAKILYSFLWRSDLTKDFLEQIIARQEYVNIIYHRNYNPRLLEFITSSEHVDLSTHNLYLQFIENALKNPAGIWEHPY NAQLDDASRAVVDLITFGNGNVAGDSLRKAYYNFQNSGLKNNKTHLANDFDSVMSILSRSFIKRTCALEATHQTLKYNQK DKIKFSLFNPSISDYVLSRYNTDYWHIADMIMLYEDDDGVIFLENAVLHNKELVKNVAKIICDRKKDDAIFCNSTNYLRI GNLLDSEDFNLLFKKYELSQVCKCIEENKVINEELLNFCNKILTLQSINCSEQYVANLIFAALECDMEYYDIINMSSILE AHLPENFHDEIVEKYYSKLLDAWKYLRLEEFAADNVEKFTTKSYVQYEDDCDIEFTIDEDKLASLIAEDTADLYTPIDIS DVKDLLYYIDLESIVSDYYCQASDDESGGGGGYSSGKQDIHGIFEGFLTAKFG >Mature_773_residues MNEYDFTNLNPNEFETLANDLLSRLYNLHIESFKPGKDLGIDGRFFRFENSPATIIQCKHYALSGFTKLLYDLTNTEIPK IKKLSPEKYIVTTSVPLSPQEKEKIKENMFPFIVNTSDIFGKEDLNSLLRQFPEVEKTHYKLWIASSAVLSQFLNAKIYN ASQSVIADAYDKCANYVVTSSHSQAKEKINTTNVLVITGDPGVGKTTLAEQLCLEFVADGYEFFAITNDIEDGFAVLTRE SKQIFYFDDFLGKNYIETLRFNEDSRIMQFINTVAKSKHKKFILTSRTNILDQGYRVGPSFANGNIKNKEYLIDVSQYNH IDKAKILYSFLWRSDLTKDFLEQIIARQEYVNIIYHRNYNPRLLEFITSSEHVDLSTHNLYLQFIENALKNPAGIWEHPY NAQLDDASRAVVDLITFGNGNVAGDSLRKAYYNFQNSGLKNNKTHLANDFDSVMSILSRSFIKRTCALEATHQTLKYNQK DKIKFSLFNPSISDYVLSRYNTDYWHIADMIMLYEDDDGVIFLENAVLHNKELVKNVAKIICDRKKDDAIFCNSTNYLRI GNLLDSEDFNLLFKKYELSQVCKCIEENKVINEELLNFCNKILTLQSINCSEQYVANLIFAALECDMEYYDIINMSSILE AHLPENFHDEIVEKYYSKLLDAWKYLRLEEFAADNVEKFTTKSYVQYEDDCDIEFTIDEDKLASLIAEDTADLYTPIDIS DVKDLLYYIDLESIVSDYYCQASDDESGGGGGYSSGKQDIHGIFEGFLTAKFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88954; Mature: 88954
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEYDFTNLNPNEFETLANDLLSRLYNLHIESFKPGKDLGIDGRFFRFENSPATIIQCKH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEHH YALSGFTKLLYDLTNTEIPKIKKLSPEKYIVTTSVPLSPQEKEKIKENMFPFIVNTSDIF HHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEECCHHHC GKEDLNSLLRQFPEVEKTHYKLWIASSAVLSQFLNAKIYNASQSVIADAYDKCANYVVTS CHHHHHHHHHHCCCHHHCEEEEEEEHHHHHHHHHCCEEECCHHHHHHHHHHHHHCCEEEC SHSQAKEKINTTNVLVITGDPGVGKTTLAEQLCLEFVADGYEFFAITNDIEDGFAVLTRE CCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEC SKQIFYFDDFLGKNYIETLRFNEDSRIMQFINTVAKSKHKKFILTSRTNILDQGYRVGPS CCEEEEEHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCC FANGNIKNKEYLIDVSQYNHIDKAKILYSFLWRSDLTKDFLEQIIARQEYVNIIYHRNYN CCCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC PRLLEFITSSEHVDLSTHNLYLQFIENALKNPAGIWEHPYNAQLDDASRAVVDLITFGNG CHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHEEEECCC NVAGDSLRKAYYNFQNSGLKNNKTHLANDFDSVMSILSRSFIKRTCALEATHQTLKYNQK CCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DKIKFSLFNPSISDYVLSRYNTDYWHIADMIMLYEDDDGVIFLENAVLHNKELVKNVAKI CCEEEEEECCCHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEECHHHCCHHHHHHHHHH ICDRKKDDAIFCNSTNYLRIGNLLDSEDFNLLFKKYELSQVCKCIEENKVINEELLNFCN HHCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KILTLQSINCSEQYVANLIFAALECDMEYYDIINMSSILEAHLPENFHDEIVEKYYSKLL HHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DAWKYLRLEEFAADNVEKFTTKSYVQYEDDCDIEFTIDEDKLASLIAEDTADLYTPIDIS HHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCEEEEECHHHHHHHHHHHHHHHCCCCCHH DVKDLLYYIDLESIVSDYYCQASDDESGGGGGYSSGKQDIHGIFEGFLTAKFG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNEYDFTNLNPNEFETLANDLLSRLYNLHIESFKPGKDLGIDGRFFRFENSPATIIQCKH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCEEEEEHH YALSGFTKLLYDLTNTEIPKIKKLSPEKYIVTTSVPLSPQEKEKIKENMFPFIVNTSDIF HHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCEEECCHHHC GKEDLNSLLRQFPEVEKTHYKLWIASSAVLSQFLNAKIYNASQSVIADAYDKCANYVVTS CHHHHHHHHHHCCCHHHCEEEEEEEHHHHHHHHHCCEEECCHHHHHHHHHHHHHCCEEEC SHSQAKEKINTTNVLVITGDPGVGKTTLAEQLCLEFVADGYEFFAITNDIEDGFAVLTRE CCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEEC SKQIFYFDDFLGKNYIETLRFNEDSRIMQFINTVAKSKHKKFILTSRTNILDQGYRVGPS CCEEEEEHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCCCCC FANGNIKNKEYLIDVSQYNHIDKAKILYSFLWRSDLTKDFLEQIIARQEYVNIIYHRNYN CCCCCCCCCEEEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCC PRLLEFITSSEHVDLSTHNLYLQFIENALKNPAGIWEHPYNAQLDDASRAVVDLITFGNG CHHHHHHCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHEEEECCC NVAGDSLRKAYYNFQNSGLKNNKTHLANDFDSVMSILSRSFIKRTCALEATHQTLKYNQK CCCHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DKIKFSLFNPSISDYVLSRYNTDYWHIADMIMLYEDDDGVIFLENAVLHNKELVKNVAKI CCEEEEEECCCHHHHHHHHCCCCCEEEEEEEEEEECCCCEEEEECHHHCCHHHHHHHHHH ICDRKKDDAIFCNSTNYLRIGNLLDSEDFNLLFKKYELSQVCKCIEENKVINEELLNFCN HHCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KILTLQSINCSEQYVANLIFAALECDMEYYDIINMSSILEAHLPENFHDEIVEKYYSKLL HHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH DAWKYLRLEEFAADNVEKFTTKSYVQYEDDCDIEFTIDEDKLASLIAEDTADLYTPIDIS HHHHHHHHHHHHHCCHHHHHHHHHEEECCCCCEEEEECHHHHHHHHHHHHHHHCCCCCHH DVKDLLYYIDLESIVSDYYCQASDDESGGGGGYSSGKQDIHGIFEGFLTAKFG HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]