Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

Click here to switch to the map view.

The map label for this gene is 220904480

Identifier: 220904480

GI number: 220904480

Start: 1424438

End: 1424866

Strand: Reverse

Name: 220904480

Synonym: Ddes_1210

Alternate gene names: NA

Gene position: 1424866-1424438 (Counterclockwise)

Preceding gene: 220904481

Following gene: 220904473

Centisome position: 49.59

GC content: 48.72

Gene sequence:

>429_bases
ATGAAAAAACATTTTTCTACTTTACTGTTGGTTGCGGCCATATTGACGGCTAACCTGGCCACGGGGGCTATTGCCTCTGG
CAAGAAAATTGATGAACCCATGCAGGCGGCAATAACATGGCTTTCTCTGGCTGATGCCGTAAAGGCACAAGACAGATGGA
ATCAGGCGGCCGGAGCTTTTAAAGCCGGCATTGAACTGCAAGACTGGGAAACAACCTTGCCCAAGGCCCGGCAACCCTTG
GGAGCAGTCAAACAACGAAAGCACCTTGCCACTGAAGCCACCACTGCCCTGCCTGGCGTTCCGGACGGGGAGTATGCCAT
CATGGGTTTTCAAACGGAATTTGCTAATAAAAAAAGCGCTACAGAAATTTTGGTACTTCAAAAAGAAGCAGATGGAGCAT
GGCGCACTGTTGGATATTTTATTCAATAG

Upstream 100 bases:

>100_bases
CGATTGAGCTGGGCGGCCTTGCAAGTGGTCGTGCACGGCAGCTGACAGCCGCTGAAATCAAGGTACTGAAAGAAAGTGTC
TGCTTACAGGAGGTACATTG

Downstream 100 bases:

>100_bases
TTAAAATTAACTGCACAAAAATACACCCATATAAAATTTAAAATATATTCCAACCGGAAATACCATTTATATAAAAAGCT
CTCCTAATGTAGAAAGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKKHFSTLLLVAAILTANLATGAIASGKKIDEPMQAAITWLSLADAVKAQDRWNQAAGAFKAGIELQDWETTLPKARQPL
GAVKQRKHLATEATTALPGVPDGEYAIMGFQTEFANKKSATEILVLQKEADGAWRTVGYFIQ

Sequences:

>Translated_142_residues
MKKHFSTLLLVAAILTANLATGAIASGKKIDEPMQAAITWLSLADAVKAQDRWNQAAGAFKAGIELQDWETTLPKARQPL
GAVKQRKHLATEATTALPGVPDGEYAIMGFQTEFANKKSATEILVLQKEADGAWRTVGYFIQ
>Mature_142_residues
MKKHFSTLLLVAAILTANLATGAIASGKKIDEPMQAAITWLSLADAVKAQDRWNQAAGAFKAGIELQDWETTLPKARQPL
GAVKQRKHLATEATTALPGVPDGEYAIMGFQTEFANKKSATEILVLQKEADGAWRTVGYFIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15354; Mature: 15354

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKHFSTLLLVAAILTANLATGAIASGKKIDEPMQAAITWLSLADAVKAQDRWNQAAGAF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAGIELQDWETTLPKARQPLGAVKQRKHLATEATTALPGVPDGEYAIMGFQTEFANKKSA
HCCCCCCCCHHHCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCCCCCC
TEILVLQKEADGAWRTVGYFIQ
CEEEEEEECCCCCEEHHCEECC
>Mature Secondary Structure
MKKHFSTLLLVAAILTANLATGAIASGKKIDEPMQAAITWLSLADAVKAQDRWNQAAGAF
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAGIELQDWETTLPKARQPLGAVKQRKHLATEATTALPGVPDGEYAIMGFQTEFANKKSA
HCCCCCCCCHHHCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCCCCCC
TEILVLQKEADGAWRTVGYFIQ
CEEEEEEECCCCCEEHHCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA