| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904434
Identifier: 220904434
GI number: 220904434
Start: 1372407
End: 1372727
Strand: Direct
Name: 220904434
Synonym: Ddes_1164
Alternate gene names: NA
Gene position: 1372407-1372727 (Clockwise)
Preceding gene: 220904433
Following gene: 220904435
Centisome position: 47.76
GC content: 49.84
Gene sequence:
>321_bases ATGAAGATTCTGCAACTTGAATCAACGAGAGAGTTTTCGGCCAACGCCATGAAGCGTTTTTTTCTTGTGGAGGATTCTCC TTATTTCAAGATGATCAATTTCAACCTCGATGCCGGGGTAACCTTTCCTGTTCATTCGCACGACCTTGACGGCGAACTGT CCATACTGGTGTTGGAAGGAGACGGCTTTTTTCTCGGCGCTGACGATGCAAAGCTGCCCGCAAAGGCGGGAGACATTCTT GTGTCAGAAATTCGTGAACCGCACGGAGTTGAAGCCACAACACGCATGCGGCTGCTGGTAACCATTACTCCGCCCATCTA G
Upstream 100 bases:
>100_bases ATTGTGCGTATACTCACAGAATCAGATACTCCGTCTGTGTATAGCAAAGATGCCAGGCGTGATTACACCATACAACAGCC AGAACAGCGAAGGAAAAAAC
Downstream 100 bases:
>100_bases CATGCTACTTGAGCTTGTCGCTTTCGCATGGAACTGCGTTGCAGCACGACAAGCACAGAAACGTTCGAGGTGTTTATGTT GCTCACAAAAGATACGACCA
Product: Cupin 2 barrel domain-containing protein
Products: NA
Alternate protein names: Cupin 2 Barrel Domain-Containing Protein; Cupin 2 Domain-Containing Protein
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MKILQLESTREFSANAMKRFFLVEDSPYFKMINFNLDAGVTFPVHSHDLDGELSILVLEGDGFFLGADDAKLPAKAGDIL VSEIREPHGVEATTRMRLLVTITPPI
Sequences:
>Translated_106_residues MKILQLESTREFSANAMKRFFLVEDSPYFKMINFNLDAGVTFPVHSHDLDGELSILVLEGDGFFLGADDAKLPAKAGDIL VSEIREPHGVEATTRMRLLVTITPPI >Mature_106_residues MKILQLESTREFSANAMKRFFLVEDSPYFKMINFNLDAGVTFPVHSHDLDGELSILVLEGDGFFLGADDAKLPAKAGDIL VSEIREPHGVEATTRMRLLVTITPPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11778; Mature: 11778
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILQLESTREFSANAMKRFFLVEDSPYFKMINFNLDAGVTFPVHSHDLDGELSILVLEG CEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECC DGFFLGADDAKLPAKAGDILVSEIREPHGVEATTRMRLLVTITPPI CCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MKILQLESTREFSANAMKRFFLVEDSPYFKMINFNLDAGVTFPVHSHDLDGELSILVLEG CEEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEECC DGFFLGADDAKLPAKAGDILVSEIREPHGVEATTRMRLLVTITPPI CCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA