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The map label for this gene is ydjA [C]

Identifier: 220904428

GI number: 220904428

Start: 1367223

End: 1367732

Strand: Direct

Name: ydjA [C]

Synonym: Ddes_1158

Alternate gene names: 220904428

Gene position: 1367223-1367732 (Clockwise)

Preceding gene: 220904427

Following gene: 220904433

Centisome position: 47.58

GC content: 55.49

Gene sequence:

>510_bases
ATGGACATTTTTGAAGCTCTTTTTACCCGCCGCAGCATCCGTAAATTCACTTCCGCTGATGTCAGCGATGCAGATCTTGA
AATCATGCTGCGGGCGGCCATGGCTGCACCCAGTGCCCATAACCGCCAGCCCTGGCATTTTGTGGTTGTGCGCGACAAAG
CCCTGCTGGCTGAAATAGCCAACCGCCATCCCTATGCAAAAATGGCCGCTGAAGCTCCTCTTGCCATTGTGGTCTGCGCC
AACCCTGCCGAGGCCAAAGAGCCGCGTTACTGGCAGCAGGATTGCACAGCCGCGCTGGAGAACATGCTGCTGGCTGCGCG
GGGCAAAAATATCGGCACTGTGTGGTGCGGTATGCATCCGCTTGAAGACAGGGTTGAACCTATCCGTCAATTGCTAAAAA
TTCCGGCGGATATCAATGTGCTGGCTCTGGTTGTGGCCGGACATCCGGCGCAGCCTTTTGACGAAGTTGACCGCTATCGC
GAGGACAAGGTTCATCATAATGGCTGGTAG

Upstream 100 bases:

>100_bases
TGCGGTCGCACTGACGTGCAGCAGATATGTCCCGCTTTTTCTTTTGCCTGTTATGATGTATACTGGAGTTATAAGACAGT
TATTTTCAGGAGAGTACAGT

Downstream 100 bases:

>100_bases
GCAGCTTTTGCCTGCCTGTAACAGCTTGCTGTGTTGCATGGGCCGCTTCGGGCATGATCCGTTGCGGCCCGCCTTTGTTT
TGGTGGTGCGAACAAGGGCT

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MDIFEALFTRRSIRKFTSADVSDADLEIMLRAAMAAPSAHNRQPWHFVVVRDKALLAEIANRHPYAKMAAEAPLAIVVCA
NPAEAKEPRYWQQDCTAALENMLLAARGKNIGTVWCGMHPLEDRVEPIRQLLKIPADINVLALVVAGHPAQPFDEVDRYR
EDKVHHNGW

Sequences:

>Translated_169_residues
MDIFEALFTRRSIRKFTSADVSDADLEIMLRAAMAAPSAHNRQPWHFVVVRDKALLAEIANRHPYAKMAAEAPLAIVVCA
NPAEAKEPRYWQQDCTAALENMLLAARGKNIGTVWCGMHPLEDRVEPIRQLLKIPADINVLALVVAGHPAQPFDEVDRYR
EDKVHHNGW
>Mature_169_residues
MDIFEALFTRRSIRKFTSADVSDADLEIMLRAAMAAPSAHNRQPWHFVVVRDKALLAEIANRHPYAKMAAEAPLAIVVCA
NPAEAKEPRYWQQDCTAALENMLLAARGKNIGTVWCGMHPLEDRVEPIRQLLKIPADINVLALVVAGHPAQPFDEVDRYR
EDKVHHNGW

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 19015; Mature: 19015

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFEALFTRRSIRKFTSADVSDADLEIMLRAAMAAPSAHNRQPWHFVVVRDKALLAEIA
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHH
NRHPYAKMAAEAPLAIVVCANPAEAKEPRYWQQDCTAALENMLLAARGKNIGTVWCGMHP
CCCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
LEDRVEPIRQLLKIPADINVLALVVAGHPAQPFDEVDRYREDKVHHNGW
HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDIFEALFTRRSIRKFTSADVSDADLEIMLRAAMAAPSAHNRQPWHFVVVRDKALLAEIA
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHH
NRHPYAKMAAEAPLAIVVCANPAEAKEPRYWQQDCTAALENMLLAARGKNIGTVWCGMHP
CCCCHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
LEDRVEPIRQLLKIPADINVLALVVAGHPAQPFDEVDRYREDKVHHNGW
HHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]