Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
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Accession | NC_011883 |
Length | 2,873,437 |
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The map label for this gene is 220904365
Identifier: 220904365
GI number: 220904365
Start: 1281644
End: 1282675
Strand: Reverse
Name: 220904365
Synonym: Ddes_1093
Alternate gene names: NA
Gene position: 1282675-1281644 (Counterclockwise)
Preceding gene: 220904366
Following gene: 220904364
Centisome position: 44.64
GC content: 61.43
Gene sequence:
>1032_bases ATGTCTGCACCGACACCCCCGAGCACTGGCGACACGCCTGACATCAACTGGCCCCAATGGCCCCAATGGATGGAAGACGC ACGCCTGGACGACAGCCTGGCCGCAACCGCCTACGAAGAAACGCCGCCGTCATGGCGGGCCGCCATAAAAACAGGGTTGG CTCTGGCGAATATGCATTTCGGCTCCAGTGCCGGGCATGGCCGCGAAACACAGAACAACGACCGGCTCGGTTTCTGGCGT GAACATGAAAACCATGCCGCAGCCTGGACGGTCATTGTCTTTCCGCCGTCTTATGCGGCGGCGGCACGTCTGGCAGCGGC ATGCATCTCTCCCATTTTGGCCGATGTTCCTCTGGTGGGCGCTGTATGCATTGGGGGAACGCCCCACTCATCCGCCCTGG TCAGTCTGGAACTAAGCGGCGTGGAAGATATTTTTGTGCTTGACGTTCATGCTCTGCATGCACTGCTGGAGCAGTGCGGT CCCGGCCCGGGGCGCCTCCTGTTGCTGCACACAGGCGAACTGGAACTGACTGCCGCCTTTGCCCGAACTCTGGGCCTGCC CTGCTGGGAGGAAGCCCACCCCCCGACACTGATCCTGCCCCCGGCAGAGCCAGGAGAAATATCCGGCGCGTGTACCGAAG CCCGGACATTTGACCCGAAAGTGCTGGCCTTTGCACAGGCCGGAGCAAATTTTGTTCAGAGCACCCCCACGGTGCACCCG CCTTTTTCTGAAAATGCAGGGCAAGACACGCCGCCGCACGGCGCATCAGCGCTGCACGCACCCGCACAGGATGTTTTTTT ACCGAATGCAACGGAACGTCTGCTGCCTGCTGCCGGAATGATCCCGTCAAAACCGGATGCGCAGTATGTTTCCTCCGGCC ATGCCCGGCATGCCGCCTGCTGCCGTAAAGACGGCGCACTCCCCTGCGCTCCCCTGCTGACCCTGACTCCGGGCTGCGAG GGTTTCTGGCTGCATCCCGGCCTTACACCGGATTTTTTTCGCGTACACAGTCTGGCCTTCGGCCTGTTATAA
Upstream 100 bases:
>100_bases CCCGGCGGCACCGGGCCGCAATCCGTAGCCGCGCAGGTGGCTCAGCTCAGGACATGGCTTGCCGGTATGGACGGCATGGT CCAGTAACAGGAAGCCTGCC
Downstream 100 bases:
>100_bases CCAGCCAGCCCGGGAGCCGCCATGTCGAGCCAGTCCAGCATTGACCGCATCCGCAACATCGGCATCATAGCCCATATCGA CGCAGGCAAGACCACCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MSAPTPPSTGDTPDINWPQWPQWMEDARLDDSLAATAYEETPPSWRAAIKTGLALANMHFGSSAGHGRETQNNDRLGFWR EHENHAAAWTVIVFPPSYAAAARLAAACISPILADVPLVGAVCIGGTPHSSALVSLELSGVEDIFVLDVHALHALLEQCG PGPGRLLLLHTGELELTAAFARTLGLPCWEEAHPPTLILPPAEPGEISGACTEARTFDPKVLAFAQAGANFVQSTPTVHP PFSENAGQDTPPHGASALHAPAQDVFLPNATERLLPAAGMIPSKPDAQYVSSGHARHAACCRKDGALPCAPLLTLTPGCE GFWLHPGLTPDFFRVHSLAFGLL
Sequences:
>Translated_343_residues MSAPTPPSTGDTPDINWPQWPQWMEDARLDDSLAATAYEETPPSWRAAIKTGLALANMHFGSSAGHGRETQNNDRLGFWR EHENHAAAWTVIVFPPSYAAAARLAAACISPILADVPLVGAVCIGGTPHSSALVSLELSGVEDIFVLDVHALHALLEQCG PGPGRLLLLHTGELELTAAFARTLGLPCWEEAHPPTLILPPAEPGEISGACTEARTFDPKVLAFAQAGANFVQSTPTVHP PFSENAGQDTPPHGASALHAPAQDVFLPNATERLLPAAGMIPSKPDAQYVSSGHARHAACCRKDGALPCAPLLTLTPGCE GFWLHPGLTPDFFRVHSLAFGLL >Mature_342_residues SAPTPPSTGDTPDINWPQWPQWMEDARLDDSLAATAYEETPPSWRAAIKTGLALANMHFGSSAGHGRETQNNDRLGFWRE HENHAAAWTVIVFPPSYAAAARLAAACISPILADVPLVGAVCIGGTPHSSALVSLELSGVEDIFVLDVHALHALLEQCGP GPGRLLLLHTGELELTAAFARTLGLPCWEEAHPPTLILPPAEPGEISGACTEARTFDPKVLAFAQAGANFVQSTPTVHPP FSENAGQDTPPHGASALHAPAQDVFLPNATERLLPAAGMIPSKPDAQYVSSGHARHAACCRKDGALPCAPLLTLTPGCEG FWLHPGLTPDFFRVHSLAFGLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36250; Mature: 36119
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPTPPSTGDTPDINWPQWPQWMEDARLDDSLAATAYEETPPSWRAAIKTGLALANMHF CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHEEECC GSSAGHGRETQNNDRLGFWREHENHAAAWTVIVFPPSYAAAARLAAACISPILADVPLVG CCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHE AVCIGGTPHSSALVSLELSGVEDIFVLDVHALHALLEQCGPGPGRLLLLHTGELELTAAF EEEECCCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCEEHHHHH ARTLGLPCWEEAHPPTLILPPAEPGEISGACTEARTFDPKVLAFAQAGANFVQSTPTVHP HHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCC PFSENAGQDTPPHGASALHAPAQDVFLPNATERLLPAAGMIPSKPDAQYVSSGHARHAAC CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCHHHHHH CRKDGALPCAPLLTLTPGCEGFWLHPGLTPDFFRVHSLAFGLL HHCCCCCCCCCCEEECCCCCCEEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure SAPTPPSTGDTPDINWPQWPQWMEDARLDDSLAATAYEETPPSWRAAIKTGLALANMHF CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHEEECC GSSAGHGRETQNNDRLGFWREHENHAAAWTVIVFPPSYAAAARLAAACISPILADVPLVG CCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCHHE AVCIGGTPHSSALVSLELSGVEDIFVLDVHALHALLEQCGPGPGRLLLLHTGELELTAAF EEEECCCCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEECCCEEHHHHH ARTLGLPCWEEAHPPTLILPPAEPGEISGACTEARTFDPKVLAFAQAGANFVQSTPTVHP HHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCCC PFSENAGQDTPPHGASALHAPAQDVFLPNATERLLPAAGMIPSKPDAQYVSSGHARHAAC CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCHHHHHCCCHHHHHH CRKDGALPCAPLLTLTPGCEGFWLHPGLTPDFFRVHSLAFGLL HHCCCCCCCCCCEEECCCCCCEEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA