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The map label for this gene is 220904356

Identifier: 220904356

GI number: 220904356

Start: 1269535

End: 1270536

Strand: Reverse

Name: 220904356

Synonym: Ddes_1084

Alternate gene names: NA

Gene position: 1270536-1269535 (Counterclockwise)

Preceding gene: 220904357

Following gene: 220904355

Centisome position: 44.22

GC content: 58.88

Gene sequence:

>1002_bases
GTGTTTGTGTCAGTATTGTCCCGGCTTGGACGGCATTGCGCCGTTGTTATGGTCTTCGGCCTTCTTTGCCTGTCGTTGTT
TTTCTCGTCCCCATCTTCTGCTCTGTCGGCAGAAACGGCCGGAAAACGTACCTCCCCCGATGTCCCGCCTGCTACGGTTG
CCGTAACGCCCCCCCCCGCCACGCCCACTGCGGTTGCCAGTAGCTCCGGCAATATTCCTGACAGCATTGCCCAGCCAGAT
CCAGCCGGACCTGAAGTTCCGGGCAAGGAAAGCAAAAACAATTCCGGGCAGCCCGCACCTGCACCGTCCGGCATGGCGGC
AGATACTGCCGTGGGGCAACTGAGCGACAGCACAAAAATTGTTTCCGAAGACAGCACAAGGGGAAATGCCGATGCTCCCC
GTGCAGAACCGCTGCCTCAACCGCTTGGTACTGTGGCGCACTGTTTTGACGGCGACACCTTTAAACTGACGGACAGGCGC
GTTGTACGGCTGGCCGGCATTGATTCGCCAGAACTGTCCAAGGGCCGCATAAAAGCCCAGTTTTTTGCACGCGAAGCCAG
AGACCAGCTCAACACGCTCACCAAGGGCCAGCAGGTGCAGCTTCTGCAAGCAGGCGTCAAGCATCGCGATTCACACGGCA
GAATTCTGGCGGAAGTGCTGCTGCCGGACGGCACGTCCCTCAACGAAATCATGATCCGCAATGGCGCGGCCTATTTTTAC
CCGCATCAGGATCTCAGCCCGCAGCTTCAGGAACGCCTCCGCAACCTCCAACATGAGGCCATAGCCGGGCGTCGCGGCAT
GTGGGCCTTTCTGCTTTCGCAACCTGTTGCCAAGAATACCTATCTCGGCAACAAGGAGTCTTTACGCTTTTTTCCCGCAG
ACTGCGCCGAGGCCCAGCACATACGCCCGCGAAACCGTGTGTATTTCGGCAACCTGATGGATGCCTTCATGGCAGGCTAC
GCTCCTGCGCGGGTGTGTTCCTTCTGGCCGGTGACGCCATGA

Upstream 100 bases:

>100_bases
CTCTGCGCGGCATACCAAAATCCGCAAGGTTTTCCGGACAGCCGCCGGGCGAATGCCGGTAACAGCAAAAACATTGCAGC
CCACGTAACAGGATATGGCC

Downstream 100 bases:

>100_bases
GCCGACAGTCCCCGGGCAGAACCACGTCAAGTCCGCTGGCCGACCAGACAGCCCTGGTCATTTTTTCCGGTGGCCAGGAC
TCCGCAACATGTCTTGCGTG

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 333; Mature: 333

Protein sequence:

>333_residues
MFVSVLSRLGRHCAVVMVFGLLCLSLFFSSPSSALSAETAGKRTSPDVPPATVAVTPPPATPTAVASSSGNIPDSIAQPD
PAGPEVPGKESKNNSGQPAPAPSGMAADTAVGQLSDSTKIVSEDSTRGNADAPRAEPLPQPLGTVAHCFDGDTFKLTDRR
VVRLAGIDSPELSKGRIKAQFFAREARDQLNTLTKGQQVQLLQAGVKHRDSHGRILAEVLLPDGTSLNEIMIRNGAAYFY
PHQDLSPQLQERLRNLQHEAIAGRRGMWAFLLSQPVAKNTYLGNKESLRFFPADCAEAQHIRPRNRVYFGNLMDAFMAGY
APARVCSFWPVTP

Sequences:

>Translated_333_residues
MFVSVLSRLGRHCAVVMVFGLLCLSLFFSSPSSALSAETAGKRTSPDVPPATVAVTPPPATPTAVASSSGNIPDSIAQPD
PAGPEVPGKESKNNSGQPAPAPSGMAADTAVGQLSDSTKIVSEDSTRGNADAPRAEPLPQPLGTVAHCFDGDTFKLTDRR
VVRLAGIDSPELSKGRIKAQFFAREARDQLNTLTKGQQVQLLQAGVKHRDSHGRILAEVLLPDGTSLNEIMIRNGAAYFY
PHQDLSPQLQERLRNLQHEAIAGRRGMWAFLLSQPVAKNTYLGNKESLRFFPADCAEAQHIRPRNRVYFGNLMDAFMAGY
APARVCSFWPVTP
>Mature_333_residues
MFVSVLSRLGRHCAVVMVFGLLCLSLFFSSPSSALSAETAGKRTSPDVPPATVAVTPPPATPTAVASSSGNIPDSIAQPD
PAGPEVPGKESKNNSGQPAPAPSGMAADTAVGQLSDSTKIVSEDSTRGNADAPRAEPLPQPLGTVAHCFDGDTFKLTDRR
VVRLAGIDSPELSKGRIKAQFFAREARDQLNTLTKGQQVQLLQAGVKHRDSHGRILAEVLLPDGTSLNEIMIRNGAAYFY
PHQDLSPQLQERLRNLQHEAIAGRRGMWAFLLSQPVAKNTYLGNKESLRFFPADCAEAQHIRPRNRVYFGNLMDAFMAGY
APARVCSFWPVTP

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 35784; Mature: 35784

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVSVLSRLGRHCAVVMVFGLLCLSLFFSSPSSALSAETAGKRTSPDVPPATVAVTPPPA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEECCCCC
TPTAVASSSGNIPDSIAQPDPAGPEVPGKESKNNSGQPAPAPSGMAADTAVGQLSDSTKI
CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEE
VSEDSTRGNADAPRAEPLPQPLGTVAHCFDGDTFKLTDRRVVRLAGIDSPELSKGRIKAQ
EECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCCCCHHHHH
FFAREARDQLNTLTKGQQVQLLQAGVKHRDSHGRILAEVLLPDGTSLNEIMIRNGAAYFY
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHEEEECCCEEEC
PHQDLSPQLQERLRNLQHEAIAGRRGMWAFLLSQPVAKNTYLGNKESLRFFPADCAEAQH
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHH
IRPRNRVYFGNLMDAFMAGYAPARVCSFWPVTP
CCCCCCEEEHHHHHHHHHCCCHHHHHCCCCCCC
>Mature Secondary Structure
MFVSVLSRLGRHCAVVMVFGLLCLSLFFSSPSSALSAETAGKRTSPDVPPATVAVTPPPA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEECCCCC
TPTAVASSSGNIPDSIAQPDPAGPEVPGKESKNNSGQPAPAPSGMAADTAVGQLSDSTKI
CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEE
VSEDSTRGNADAPRAEPLPQPLGTVAHCFDGDTFKLTDRRVVRLAGIDSPELSKGRIKAQ
EECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCCCCHHHHH
FFAREARDQLNTLTKGQQVQLLQAGVKHRDSHGRILAEVLLPDGTSLNEIMIRNGAAYFY
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHEEEECCCEEEC
PHQDLSPQLQERLRNLQHEAIAGRRGMWAFLLSQPVAKNTYLGNKESLRFFPADCAEAQH
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEECCCCHHHHHH
IRPRNRVYFGNLMDAFMAGYAPARVCSFWPVTP
CCCCCCEEEHHHHHHHHHCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]