| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904354
Identifier: 220904354
GI number: 220904354
Start: 1268214
End: 1268780
Strand: Reverse
Name: 220904354
Synonym: Ddes_1082
Alternate gene names: NA
Gene position: 1268780-1268214 (Counterclockwise)
Preceding gene: 220904355
Following gene: 220904352
Centisome position: 44.16
GC content: 59.79
Gene sequence:
>567_bases ATGTCCAAAAAACAGTTAAGCGCGGCCCAGGGCGTTGAGGTGGCCTGTATTCTTTTCACTCTCAACACGGATCCCGAGGG CATGGTGCGCCTGGCACACAGCGCCCTCCTGCCTCCTGCCTACCTTGAAGGCCCGGGGGCCATCCGGTTTTGTGCGGAAT GGCGGGCCTTCACCCATGCCGTTATCACAGCCGGGCTTATGCAGCACGCTCCAAACAGTGTGCTCATGGCCTACCTGCGC CAGACAGGGAACCTGCTGAGCCGGACGTCCGCGCCTTTGAATGAAGAATGCGGTCAGGCCGCAGAAAATCAGGAGACAAT TGCCCCCGAAGAACTGGAATCCTTTGTGGATGGCCCGTTTGCCGGATATATGCCCTTGCTTGCCCAGGGGCAGCAGGCCC GCTGCCCGGACCTTTTCTGCCAGCGTCTGGCGTCGGAAACGGCTCGGGCCAAAGGCGAAGCAAGCCCACCCGATGATCAG TCCAAAGCGCGTTTGGCCGCGACCATGGCCATGCTTGTAAGTGCGGTGTGGGACAAGCTGGAAAATTACGAATTCCTGGC CGATTAG
Upstream 100 bases:
>100_bases ATCCCTGGGGCTACGGCTGCGGGCAATGTCCGGCCTGCCGTCTGCGGGCGGCGGGATATACCGAATATCTGACCGAAAAG TCCGAAGCAAAGGAGCGGGT
Downstream 100 bases:
>100_bases AGCATTTTCATATTGAAGCGCCCGACGCCTGCATGAGCAAAAGTCCGTCATGAAGGTAAACGTAGATTCGGCACTTGCCT GAAAGATATACGAAAAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSKKQLSAAQGVEVACILFTLNTDPEGMVRLAHSALLPPAYLEGPGAIRFCAEWRAFTHAVITAGLMQHAPNSVLMAYLR QTGNLLSRTSAPLNEECGQAAENQETIAPEELESFVDGPFAGYMPLLAQGQQARCPDLFCQRLASETARAKGEASPPDDQ SKARLAATMAMLVSAVWDKLENYEFLAD
Sequences:
>Translated_188_residues MSKKQLSAAQGVEVACILFTLNTDPEGMVRLAHSALLPPAYLEGPGAIRFCAEWRAFTHAVITAGLMQHAPNSVLMAYLR QTGNLLSRTSAPLNEECGQAAENQETIAPEELESFVDGPFAGYMPLLAQGQQARCPDLFCQRLASETARAKGEASPPDDQ SKARLAATMAMLVSAVWDKLENYEFLAD >Mature_187_residues SKKQLSAAQGVEVACILFTLNTDPEGMVRLAHSALLPPAYLEGPGAIRFCAEWRAFTHAVITAGLMQHAPNSVLMAYLRQ TGNLLSRTSAPLNEECGQAAENQETIAPEELESFVDGPFAGYMPLLAQGQQARCPDLFCQRLASETARAKGEASPPDDQS KARLAATMAMLVSAVWDKLENYEFLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20330; Mature: 20199
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKQLSAAQGVEVACILFTLNTDPEGMVRLAHSALLPPAYLEGPGAIRFCAEWRAFTHA CCCHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHH VITAGLMQHAPNSVLMAYLRQTGNLLSRTSAPLNEECGQAAENQETIAPEELESFVDGPF HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHCCCCCCCHHHHHHHHCCCC AGYMPLLAQGQQARCPDLFCQRLASETARAKGEASPPDDQSKARLAATMAMLVSAVWDKL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ENYEFLAD HCCCCCCC >Mature Secondary Structure SKKQLSAAQGVEVACILFTLNTDPEGMVRLAHSALLPPAYLEGPGAIRFCAEWRAFTHA CCHHHHHHCCCEEEEEEEEECCCHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHH VITAGLMQHAPNSVLMAYLRQTGNLLSRTSAPLNEECGQAAENQETIAPEELESFVDGPF HHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHCCCCCCCHHHHHHHHCCCC AGYMPLLAQGQQARCPDLFCQRLASETARAKGEASPPDDQSKARLAATMAMLVSAVWDKL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ENYEFLAD HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA