Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904351

Identifier: 220904351

GI number: 220904351

Start: 1265188

End: 1265910

Strand: Reverse

Name: 220904351

Synonym: Ddes_1079

Alternate gene names: NA

Gene position: 1265910-1265188 (Counterclockwise)

Preceding gene: 220904352

Following gene: 220904350

Centisome position: 44.06

GC content: 59.2

Gene sequence:

>723_bases
ATGGCAAAACGTCTTATTATCGAAATTGACGAAGACAAGTGCAACGGCTGCGGCCAATGTGTACTGGACTGTGCCGAAGG
CGCGCTGGCCATAGTGGACGGCAAGGCCAAACTCATACGGGACTCTTACTGCGACGGACTTGGCGCATGTCTTAGCTGTC
CTGAAGGAGCTCTGCAGCTTATCGAACGCGAGGCAGAAGAGTTTGATGAGGAGGCGGCCCTGGCGGCCAAGGCTGAGCGC
GAAGGAACAGCCCCTGCCCACGCAGGACACGGGGCGCAGGGCATGACGCCCAGACCGGGTGGATGCCCGGGCAGCATGGC
GCGTGCTCTCAAACCTCTGTCCCCAGTTACGGCGGCGGCCAACCCCGGACTTGCCGTGGATCTGCCCTCCTGGCCTATCC
AGCTGCGGCTTGTTCCTCCCACAGCCCCGTTTCTCAAGGGCGCTCAGATACTGCTGGCCGCCCACTGTGCCGGCTTTGCC
CTGCCCAATCTGCATAAAGACTGGCTTGCCGGACGCATACCTGTTATCGCCTGTCCCAAGCTTGAAGATAATGCGGCCCT
TTTGGAAAAGCTCACAGCCATCATAAAATCGGGACAGATCGCAAGCCTCACAGTACTGCGCATGAGCGTGCCGTGCTGTG
GCGGGCTTGAACACCTGGCCCAGCAGGCCCTTAAAGACGCACAAAGTGACCTGAAAATGGAATGTCATGTGGTCAAGCTC
TAG

Upstream 100 bases:

>100_bases
CCTGGGGTTTTCGCGGCCCTGCGGAACTGCGCGCCGCTGGAGCCGATCATATCATCGACGCCCCGGCCCAACTGATTGAA
CTGACGGTGGAGATATAGCC

Downstream 100 bases:

>100_bases
CAGCAGACAACAAAAAAACGCAGACGACGGCGTTAAAAAGCAGCGCCAGTTATAGCGTCTTGACAAAACATATCTAATTG
CTATGTTTTAAGGGCGGGTC

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MAKRLIIEIDEDKCNGCGQCVLDCAEGALAIVDGKAKLIRDSYCDGLGACLSCPEGALQLIEREAEEFDEEAALAAKAER
EGTAPAHAGHGAQGMTPRPGGCPGSMARALKPLSPVTAAANPGLAVDLPSWPIQLRLVPPTAPFLKGAQILLAAHCAGFA
LPNLHKDWLAGRIPVIACPKLEDNAALLEKLTAIIKSGQIASLTVLRMSVPCCGGLEHLAQQALKDAQSDLKMECHVVKL

Sequences:

>Translated_240_residues
MAKRLIIEIDEDKCNGCGQCVLDCAEGALAIVDGKAKLIRDSYCDGLGACLSCPEGALQLIEREAEEFDEEAALAAKAER
EGTAPAHAGHGAQGMTPRPGGCPGSMARALKPLSPVTAAANPGLAVDLPSWPIQLRLVPPTAPFLKGAQILLAAHCAGFA
LPNLHKDWLAGRIPVIACPKLEDNAALLEKLTAIIKSGQIASLTVLRMSVPCCGGLEHLAQQALKDAQSDLKMECHVVKL
>Mature_239_residues
AKRLIIEIDEDKCNGCGQCVLDCAEGALAIVDGKAKLIRDSYCDGLGACLSCPEGALQLIEREAEEFDEEAALAAKAERE
GTAPAHAGHGAQGMTPRPGGCPGSMARALKPLSPVTAAANPGLAVDLPSWPIQLRLVPPTAPFLKGAQILLAAHCAGFAL
PNLHKDWLAGRIPVIACPKLEDNAALLEKLTAIIKSGQIASLTVLRMSVPCCGGLEHLAQQALKDAQSDLKMECHVVKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25096; Mature: 24964

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRLIIEIDEDKCNGCGQCVLDCAEGALAIVDGKAKLIRDSYCDGLGACLSCPEGALQL
CCCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHH
IEREAEEFDEEAALAAKAEREGTAPAHAGHGAQGMTPRPGGCPGSMARALKPLSPVTAAA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHCC
NPGLAVDLPSWPIQLRLVPPTAPFLKGAQILLAAHCAGFALPNLHKDWLAGRIPVIACPK
CCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEECCC
LEDNAALLEKLTAIIKSGQIASLTVLRMSVPCCGGLEHLAQQALKDAQSDLKMECHVVKL
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEC
>Mature Secondary Structure 
AKRLIIEIDEDKCNGCGQCVLDCAEGALAIVDGKAKLIRDSYCDGLGACLSCPEGALQL
CCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHH
IEREAEEFDEEAALAAKAEREGTAPAHAGHGAQGMTPRPGGCPGSMARALKPLSPVTAAA
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHCC
NPGLAVDLPSWPIQLRLVPPTAPFLKGAQILLAAHCAGFALPNLHKDWLAGRIPVIACPK
CCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEECCC
LEDNAALLEKLTAIIKSGQIASLTVLRMSVPCCGGLEHLAQQALKDAQSDLKMECHVVKL
CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]