| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904351
Identifier: 220904351
GI number: 220904351
Start: 1265188
End: 1265910
Strand: Reverse
Name: 220904351
Synonym: Ddes_1079
Alternate gene names: NA
Gene position: 1265910-1265188 (Counterclockwise)
Preceding gene: 220904352
Following gene: 220904350
Centisome position: 44.06
GC content: 59.2
Gene sequence:
>723_bases ATGGCAAAACGTCTTATTATCGAAATTGACGAAGACAAGTGCAACGGCTGCGGCCAATGTGTACTGGACTGTGCCGAAGG CGCGCTGGCCATAGTGGACGGCAAGGCCAAACTCATACGGGACTCTTACTGCGACGGACTTGGCGCATGTCTTAGCTGTC CTGAAGGAGCTCTGCAGCTTATCGAACGCGAGGCAGAAGAGTTTGATGAGGAGGCGGCCCTGGCGGCCAAGGCTGAGCGC GAAGGAACAGCCCCTGCCCACGCAGGACACGGGGCGCAGGGCATGACGCCCAGACCGGGTGGATGCCCGGGCAGCATGGC GCGTGCTCTCAAACCTCTGTCCCCAGTTACGGCGGCGGCCAACCCCGGACTTGCCGTGGATCTGCCCTCCTGGCCTATCC AGCTGCGGCTTGTTCCTCCCACAGCCCCGTTTCTCAAGGGCGCTCAGATACTGCTGGCCGCCCACTGTGCCGGCTTTGCC CTGCCCAATCTGCATAAAGACTGGCTTGCCGGACGCATACCTGTTATCGCCTGTCCCAAGCTTGAAGATAATGCGGCCCT TTTGGAAAAGCTCACAGCCATCATAAAATCGGGACAGATCGCAAGCCTCACAGTACTGCGCATGAGCGTGCCGTGCTGTG GCGGGCTTGAACACCTGGCCCAGCAGGCCCTTAAAGACGCACAAAGTGACCTGAAAATGGAATGTCATGTGGTCAAGCTC TAG
Upstream 100 bases:
>100_bases CCTGGGGTTTTCGCGGCCCTGCGGAACTGCGCGCCGCTGGAGCCGATCATATCATCGACGCCCCGGCCCAACTGATTGAA CTGACGGTGGAGATATAGCC
Downstream 100 bases:
>100_bases CAGCAGACAACAAAAAAACGCAGACGACGGCGTTAAAAAGCAGCGCCAGTTATAGCGTCTTGACAAAACATATCTAATTG CTATGTTTTAAGGGCGGGTC
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MAKRLIIEIDEDKCNGCGQCVLDCAEGALAIVDGKAKLIRDSYCDGLGACLSCPEGALQLIEREAEEFDEEAALAAKAER EGTAPAHAGHGAQGMTPRPGGCPGSMARALKPLSPVTAAANPGLAVDLPSWPIQLRLVPPTAPFLKGAQILLAAHCAGFA LPNLHKDWLAGRIPVIACPKLEDNAALLEKLTAIIKSGQIASLTVLRMSVPCCGGLEHLAQQALKDAQSDLKMECHVVKL
Sequences:
>Translated_240_residues MAKRLIIEIDEDKCNGCGQCVLDCAEGALAIVDGKAKLIRDSYCDGLGACLSCPEGALQLIEREAEEFDEEAALAAKAER EGTAPAHAGHGAQGMTPRPGGCPGSMARALKPLSPVTAAANPGLAVDLPSWPIQLRLVPPTAPFLKGAQILLAAHCAGFA LPNLHKDWLAGRIPVIACPKLEDNAALLEKLTAIIKSGQIASLTVLRMSVPCCGGLEHLAQQALKDAQSDLKMECHVVKL >Mature_239_residues AKRLIIEIDEDKCNGCGQCVLDCAEGALAIVDGKAKLIRDSYCDGLGACLSCPEGALQLIEREAEEFDEEAALAAKAERE GTAPAHAGHGAQGMTPRPGGCPGSMARALKPLSPVTAAANPGLAVDLPSWPIQLRLVPPTAPFLKGAQILLAAHCAGFAL PNLHKDWLAGRIPVIACPKLEDNAALLEKLTAIIKSGQIASLTVLRMSVPCCGGLEHLAQQALKDAQSDLKMECHVVKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25096; Mature: 24964
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRLIIEIDEDKCNGCGQCVLDCAEGALAIVDGKAKLIRDSYCDGLGACLSCPEGALQL CCCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHH IEREAEEFDEEAALAAKAEREGTAPAHAGHGAQGMTPRPGGCPGSMARALKPLSPVTAAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHCC NPGLAVDLPSWPIQLRLVPPTAPFLKGAQILLAAHCAGFALPNLHKDWLAGRIPVIACPK CCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEECCC LEDNAALLEKLTAIIKSGQIASLTVLRMSVPCCGGLEHLAQQALKDAQSDLKMECHVVKL CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEC >Mature Secondary Structure AKRLIIEIDEDKCNGCGQCVLDCAEGALAIVDGKAKLIRDSYCDGLGACLSCPEGALQL CCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHH IEREAEEFDEEAALAAKAEREGTAPAHAGHGAQGMTPRPGGCPGSMARALKPLSPVTAAA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHCC NPGLAVDLPSWPIQLRLVPPTAPFLKGAQILLAAHCAGFALPNLHKDWLAGRIPVIACPK CCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEECCC LEDNAALLEKLTAIIKSGQIASLTVLRMSVPCCGGLEHLAQQALKDAQSDLKMECHVVKL CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]