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The map label for this gene is yfhP [C]

Identifier: 220904349

GI number: 220904349

Start: 1263574

End: 1264017

Strand: Reverse

Name: yfhP [C]

Synonym: Ddes_1077

Alternate gene names: 220904349

Gene position: 1264017-1263574 (Counterclockwise)

Preceding gene: 220904350

Following gene: 220904348

Centisome position: 43.99

GC content: 55.63

Gene sequence:

>444_bases
ATGCGATTTTCGACCAGAACCCGTTATGGATTGCGTTTTCTGCTGCGTCTGGCAGCCCAGCCCCAGGGCAGCCTTTTGCA
ACTGGGGCAGGTAGCCCGCGAGGAAAACATTTCTTCGGGCTACCTGGAGCAGATCGTCCGGGCCTTGCGTCCCATGGGCA
TCCTCCGGGCCGTGCGCGGTTCCGGCGGCGGCTACGCCCTGGCAAAGCCGCCTGCAGAAATTAATATGGAAGAAGTTTTT
CAACACCTTGAAGGCGAAATTTCTCCGGTGCGCTGCCTCAGCAAGGGGCGTTCATGCCAGAGAGAAAAGCAGTGCTCCAC
ACGTGAATTCTGGAGCGAACTTGACGGACACATACGCAGCTTTCTGCAGCAAAGAACCCTGCAGGAAATCATAGAATCAG
AGAAGCACTCCGCTTCGGGAGGCAATTATGTGGAATTACACTGA

Upstream 100 bases:

>100_bases
TATCAGGAAACTCCGTTCAGCCTTACCGCCATCGCTCAAAACCGCGAAGCGCGGGCTGGCGCATAGCCTAATCCGGCCAA
TTGCCGAAACGAGGAGCCTT

Downstream 100 bases:

>100_bases
AGCCGTTCATGACCATTTTCTGCGCCCGCACAACGTGGGACCCCTGGAAGGAGCCAATGCCATTGGCGAGGTGGGCAGCC
TGGCCTGTGGCGACGCTCTC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRFSTRTRYGLRFLLRLAAQPQGSLLQLGQVAREENISSGYLEQIVRALRPMGILRAVRGSGGGYALAKPPAEINMEEVF
QHLEGEISPVRCLSKGRSCQREKQCSTREFWSELDGHIRSFLQQRTLQEIIESEKHSASGGNYVELH

Sequences:

>Translated_147_residues
MRFSTRTRYGLRFLLRLAAQPQGSLLQLGQVAREENISSGYLEQIVRALRPMGILRAVRGSGGGYALAKPPAEINMEEVF
QHLEGEISPVRCLSKGRSCQREKQCSTREFWSELDGHIRSFLQQRTLQEIIESEKHSASGGNYVELH
>Mature_147_residues
MRFSTRTRYGLRFLLRLAAQPQGSLLQLGQVAREENISSGYLEQIVRALRPMGILRAVRGSGGGYALAKPPAEINMEEVF
QHLEGEISPVRCLSKGRSCQREKQCSTREFWSELDGHIRSFLQQRTLQEIIESEKHSASGGNYVELH

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=135, Percent_Identity=31.1111111111111, Blast_Score=72, Evalue=1e-14,
Organism=Escherichia coli, GI1790621, Length=132, Percent_Identity=29.5454545454545, Blast_Score=63, Evalue=7e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16631; Mature: 16631

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSTRTRYGLRFLLRLAAQPQGSLLQLGQVAREENISSGYLEQIVRALRPMGILRAVRG
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
SGGGYALAKPPAEINMEEVFQHLEGEISPVRCLSKGRSCQREKQCSTREFWSELDGHIRS
CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHH
FLQQRTLQEIIESEKHSASGGNYVELH
HHHHHHHHHHHHHHHCCCCCCCEEEEC
>Mature Secondary Structure
MRFSTRTRYGLRFLLRLAAQPQGSLLQLGQVAREENISSGYLEQIVRALRPMGILRAVRG
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
SGGGYALAKPPAEINMEEVFQHLEGEISPVRCLSKGRSCQREKQCSTREFWSELDGHIRS
CCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHH
FLQQRTLQEIIESEKHSASGGNYVELH
HHHHHHHHHHHHHHHCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]