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The map label for this gene is 220904319

Identifier: 220904319

GI number: 220904319

Start: 1227119

End: 1227790

Strand: Reverse

Name: 220904319

Synonym: Ddes_1046

Alternate gene names: NA

Gene position: 1227790-1227119 (Counterclockwise)

Preceding gene: 220904320

Following gene: 220904317

Centisome position: 42.73

GC content: 52.98

Gene sequence:

>672_bases
ATGTTCAAAAGAATCTTTCTGACCGTCGCGCTGACTATGGCCCTTGCTGTACCCGCCTTTGCGCAAAACTCCGGCTTTTA
TCTTGGACTCAAATTCATTGATTCCATCCAGAGCACCGGAAATGTCTCTACCAGCAAGGGCGCAAGCTTCTTTGACACCG
GCGACTACAGCCAGAACACCGTAGGGGGCGGCGCCTTTGTCGGTTACGACTTTTACCCTGCCAACGACATCCCCTTACGC
GCCGAAATTGAATACGCCATTCGCACCAATTCAGAAACGGATTGGGACGCCAAGCACGGCCTGGACGCGACCCTGAAGGG
CCGCTGGAACCTGCAGACCCTCTTCCTCAATGTGTATTGGGATTTCCACAATGACACAGCCTTTACGCCATATATCGGCG
GCGGGCTTGGCATGGGCTTTATTGAAAGCAGATACAAGGTAGAAGGTCAGGGGTACAGTGGAAGCAGCACCGATTATAAT
ACGGTATTTGCCTGGAATGCCGGGGCCGGTGTTTCCTACGCCTTTACCGAAACAATCTCTGCTGACCTGGCCTACCGCTT
CGTGGGCCTGGGTTACTACGAACATGAAAAGTCTTTTGCCGGTCAAAAGGCCAAGGTCGGCATGGCCCCTTATGCCAATG
AATTCAGCCTTGGCGTTCGCTTTACGTTCTAG

Upstream 100 bases:

>100_bases
TCAGGTATGGTCTACACAAAAGCGGATATCAATTCAGAAACAACAGGCGAATGCCAAAGAAAGGCTTTGAAAAACAGCAC
AACAAAACCTGGAGAGAATC

Downstream 100 bases:

>100_bases
CCTGTCTGCATAAAAAATTGCTTTCCACATGGTTAAGAAAGCCCCCGCCTCCGCCTGATAACCGGAAGCGGGGGCTTTCG
CCCATCCGAGTAGCCATGCG

Product: surface antigen msp4 family protein

Products: NA

Alternate protein names: Tia Invasion Determinant; Exported Surface Protein; Adhesin/Virulence Factor Hek; Outer Membrane Adhesin; Surface Antigen Msp4 Family Protein

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MFKRIFLTVALTMALAVPAFAQNSGFYLGLKFIDSIQSTGNVSTSKGASFFDTGDYSQNTVGGGAFVGYDFYPANDIPLR
AEIEYAIRTNSETDWDAKHGLDATLKGRWNLQTLFLNVYWDFHNDTAFTPYIGGGLGMGFIESRYKVEGQGYSGSSTDYN
TVFAWNAGAGVSYAFTETISADLAYRFVGLGYYEHEKSFAGQKAKVGMAPYANEFSLGVRFTF

Sequences:

>Translated_223_residues
MFKRIFLTVALTMALAVPAFAQNSGFYLGLKFIDSIQSTGNVSTSKGASFFDTGDYSQNTVGGGAFVGYDFYPANDIPLR
AEIEYAIRTNSETDWDAKHGLDATLKGRWNLQTLFLNVYWDFHNDTAFTPYIGGGLGMGFIESRYKVEGQGYSGSSTDYN
TVFAWNAGAGVSYAFTETISADLAYRFVGLGYYEHEKSFAGQKAKVGMAPYANEFSLGVRFTF
>Mature_223_residues
MFKRIFLTVALTMALAVPAFAQNSGFYLGLKFIDSIQSTGNVSTSKGASFFDTGDYSQNTVGGGAFVGYDFYPANDIPLR
AEIEYAIRTNSETDWDAKHGLDATLKGRWNLQTLFLNVYWDFHNDTAFTPYIGGGLGMGFIESRYKVEGQGYSGSSTDYN
TVFAWNAGAGVSYAFTETISADLAYRFVGLGYYEHEKSFAGQKAKVGMAPYANEFSLGVRFTF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24525; Mature: 24525

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKRIFLTVALTMALAVPAFAQNSGFYLGLKFIDSIQSTGNVSTSKGASFFDTGDYSQNT
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC
VGGGAFVGYDFYPANDIPLRAEIEYAIRTNSETDWDAKHGLDATLKGRWNLQTLFLNVYW
CCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCHHCCCCEEEECCCCEEEEEEEEEE
DFHNDTAFTPYIGGGLGMGFIESRYKVEGQGYSGSSTDYNTVFAWNAGAGVSYAFTETIS
EECCCCEECCCCCCCCCCCEECCEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEHHHHH
ADLAYRFVGLGYYEHEKSFAGQKAKVGMAPYANEFSLGVRFTF
HHHEEEEEECCEEECCHHHCCCCEEECCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MFKRIFLTVALTMALAVPAFAQNSGFYLGLKFIDSIQSTGNVSTSKGASFFDTGDYSQNT
CCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCCCCCCEEECCCCCCCC
VGGGAFVGYDFYPANDIPLRAEIEYAIRTNSETDWDAKHGLDATLKGRWNLQTLFLNVYW
CCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCHHCCCCEEEECCCCEEEEEEEEEE
DFHNDTAFTPYIGGGLGMGFIESRYKVEGQGYSGSSTDYNTVFAWNAGAGVSYAFTETIS
EECCCCEECCCCCCCCCCCEECCEEEEECCCCCCCCCCCEEEEEECCCCCCEEEEHHHHH
ADLAYRFVGLGYYEHEKSFAGQKAKVGMAPYANEFSLGVRFTF
HHHEEEEEECCEEECCHHHCCCCEEECCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA