| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904292
Identifier: 220904292
GI number: 220904292
Start: 1191973
End: 1192608
Strand: Reverse
Name: 220904292
Synonym: Ddes_1019
Alternate gene names: NA
Gene position: 1192608-1191973 (Counterclockwise)
Preceding gene: 220904293
Following gene: 220904284
Centisome position: 41.5
GC content: 38.05
Gene sequence:
>636_bases ATGAACAATAATGCGCATACGTTTTTTGAAAAGATGGCAAAATCGGACACCCTTGCCCCAAACTCGGTAAAACTCGCTAA AAACAGCGATTTTTCGGACATTGATACGGCATTTATACGAAAATATGCAGATAACACTTCTACAGTCCTTGATCTTGGAT CAGGTACCGGCTTGATTGTAAACAAACTTTATCCGTATGTTAAAAAAATCATTGCAGTAGAACCATTTTACCAGTTCACG CAATACATTACTAAAAGCTCAAATATTCAGATAGTGAATTGTGACGCTGCCAGCTTTTTATCCGATGATAAGTTTGATAT AATCTTGCTTTTTGCTGTAATGCATTACGTGGACGAAACAGAGGCGATAGCAATATATAAAAAGTATATTAACTACTTGT CGAAAGATGGAAAAATAATCATTAAAAATCAGTTTGGCATACACGACGATGTAACCATAAACGGATTCTCGGAGGAGCTG CAGGAAAATTATTTCGCACAGTACAGATTTATAAATAAAGAAGTAAAGTTATTGCAGGAAGCCGGCTTCAGTAGCGTAGA CGTGGTCGACATCTACCCCCCAAAGTGCAACCGATGGGAAAATACGCACTTTTACGCTCTCGTTGCGACAAAGTGA
Upstream 100 bases:
>100_bases ATTATCGGGTGCACAGACATACGGGTGGACTTCAAATGCGCCCATACAGCCATAGATTCTCTTGAAGTTTTGGCCCAATG CATCTTACGGGATAGCGAAA
Downstream 100 bases:
>100_bases TATTACAGCTTCCAGCTGCGCACAAACTGGATGGCGCGCTCGTAGTCCTCAAACGTATCAATATCACAGGCACGTATTTT CAGCCCCGGCATAGGAAGAA
Product: type 12 methyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MNNNAHTFFEKMAKSDTLAPNSVKLAKNSDFSDIDTAFIRKYADNTSTVLDLGSGTGLIVNKLYPYVKKIIAVEPFYQFT QYITKSSNIQIVNCDAASFLSDDKFDIILLFAVMHYVDETEAIAIYKKYINYLSKDGKIIIKNQFGIHDDVTINGFSEEL QENYFAQYRFINKEVKLLQEAGFSSVDVVDIYPPKCNRWENTHFYALVATK
Sequences:
>Translated_211_residues MNNNAHTFFEKMAKSDTLAPNSVKLAKNSDFSDIDTAFIRKYADNTSTVLDLGSGTGLIVNKLYPYVKKIIAVEPFYQFT QYITKSSNIQIVNCDAASFLSDDKFDIILLFAVMHYVDETEAIAIYKKYINYLSKDGKIIIKNQFGIHDDVTINGFSEEL QENYFAQYRFINKEVKLLQEAGFSSVDVVDIYPPKCNRWENTHFYALVATK >Mature_211_residues MNNNAHTFFEKMAKSDTLAPNSVKLAKNSDFSDIDTAFIRKYADNTSTVLDLGSGTGLIVNKLYPYVKKIIAVEPFYQFT QYITKSSNIQIVNCDAASFLSDDKFDIILLFAVMHYVDETEAIAIYKKYINYLSKDGKIIIKNQFGIHDDVTINGFSEEL QENYFAQYRFINKEVKLLQEAGFSSVDVVDIYPPKCNRWENTHFYALVATK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24131; Mature: 24131
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNAHTFFEKMAKSDTLAPNSVKLAKNSDFSDIDTAFIRKYADNTSTVLDLGSGTGLIV CCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHH NKLYPYVKKIIAVEPFYQFTQYITKSSNIQIVNCDAASFLSDDKFDIILLFAVMHYVDET HHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHCCH EAIAIYKKYINYLSKDGKIIIKNQFGIHDDVTINGFSEELQENYFAQYRFINKEVKLLQE HHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH AGFSSVDVVDIYPPKCNRWENTHFYALVATK CCCCCEEEEEECCCCCCCCCCCEEEEEEEEC >Mature Secondary Structure MNNNAHTFFEKMAKSDTLAPNSVKLAKNSDFSDIDTAFIRKYADNTSTVLDLGSGTGLIV CCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHH NKLYPYVKKIIAVEPFYQFTQYITKSSNIQIVNCDAASFLSDDKFDIILLFAVMHYVDET HHHHHHHHHHHHHCHHHHHHHHHHCCCCEEEEECCHHHHCCCCCHHHHHHHHHHHHHCCH EAIAIYKKYINYLSKDGKIIIKNQFGIHDDVTINGFSEELQENYFAQYRFINKEVKLLQE HHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHH AGFSSVDVVDIYPPKCNRWENTHFYALVATK CCCCCEEEEEECCCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA