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The map label for this gene is int315.4 [H]

Identifier: 21910802

GI number: 21910802

Start: 1270661

End: 1271815

Strand: Direct

Name: int315.4 [H]

Synonym: SpyM3_1266

Alternate gene names: 21910802

Gene position: 1270661-1271815 (Clockwise)

Preceding gene: 21910801

Following gene: 21910808

Centisome position: 66.86

GC content: 37.49

Gene sequence:

>1155_bases
ATGCCAATATCCTATCTCAAAATCAGCACTCCCCAGCGCAAAGAGAGAGGAAAAACAATGATTGAAAAATACACTAAAAA
AGATGGCACAACTGCCTATCGCTTAAGAGCATACCTTGGGGTTGATCCCGTGACTGGTAAACAAGTCAGGACAACTAGGC
AAGGTTTTAAAACAGAAAGAGAAGCTAAAAGAGCCGAGGTAAAACTTATTGATGATTTCCAGCGTCAAGGCGCTTGGAAA
AGTAATGATAAAACTACATTTGACGATGTAGCTAAACTGTGGTTTGAGCAGTACCAAAATACAGTCAAACCGTCAACATT
TCTGGTTAACCAAAATTACTATAAAACAATTTTAAAGCCACATTTAGGGCAACTGCAAATGACGAAGATAACTGTCATGA
TTTGTCAAAAATTTGTGAATTGCCTGTCTCGATATAGCGGATATACGCTTTATCTAAGTCTAGCAAACAGAATTTTTAAA
TTTGCTGTCAACTTAGGTATTATTGATAACAACCCAATGAACAAGACGTTGAGATCAAAGTGCACTTACAAAAACGTGGA
TACACTCACCAAAAAATATTACACAAAAGAGGAATTGAATACTTTCTTGAGGCTTGTGGAAGCTGAAGAAACTCTAGAGA
TGCGTCTGATTTATAGATTGCTGAGTTATGGCGGTTTTAGGATTGGTGAATTAATAGCTTTAAAAGATACCGACTTTGAT
TTCCGCAACAATACTATCAGCATTACAAAAACCATTGCTTATACAAAAGAAGGATGGGCTGTACAATCTCCTAAAACCAA
AAAAAGCAATCGCACTATATCAATGGACGCTGAGACCATGTCGTTAGCCAAATTATATATTAAGCAAAGTATCAAACCTT
TACACGGATCGTTTAAATTGTTTAATTTTGCTAGCGACACCGTGAGAAAAAGACTGGACAGATTTATATTGAAGCATGGA
TTAAAAAGGATTACTCCCCACGGGTTTAGACATACCCACGCTTCGTTGTTGTTTGAGGCTGGGATTCCCGCTAAGATTGC
ACAAGAGCGGTTAGGCCACGCTAAAATAGCAATCACGATGGATTTATATACTCACTTGTCCAAAAAATCAAAGGATAATG
TTGCTGACAAATTGGCCGAACTCGTCGCTATTTAA

Upstream 100 bases:

>100_bases
TTTTGGTCGAGGAGAGCGTAAGGCAATATGCAATCAATAAGAAGTAAGCTTTAAATAGCTCATTTTCTTATACTCTGAAT
TATATCACACAAAGGAGGTG

Downstream 100 bases:

>100_bases
CACAAACGTAGTGGGAAACGTAGTAAGTCTGTTTTTAGACTTTAAAAAAGCCTTGATATCAATGATTCTGAGAGGTAATC
TTATATTATATCAGATTTTT

Product: putative integrase - phage associated

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MPISYLKISTPQRKERGKTMIEKYTKKDGTTAYRLRAYLGVDPVTGKQVRTTRQGFKTEREAKRAEVKLIDDFQRQGAWK
SNDKTTFDDVAKLWFEQYQNTVKPSTFLVNQNYYKTILKPHLGQLQMTKITVMICQKFVNCLSRYSGYTLYLSLANRIFK
FAVNLGIIDNNPMNKTLRSKCTYKNVDTLTKKYYTKEELNTFLRLVEAEETLEMRLIYRLLSYGGFRIGELIALKDTDFD
FRNNTISITKTIAYTKEGWAVQSPKTKKSNRTISMDAETMSLAKLYIKQSIKPLHGSFKLFNFASDTVRKRLDRFILKHG
LKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIAITMDLYTHLSKKSKDNVADKLAELVAI

Sequences:

>Translated_384_residues
MPISYLKISTPQRKERGKTMIEKYTKKDGTTAYRLRAYLGVDPVTGKQVRTTRQGFKTEREAKRAEVKLIDDFQRQGAWK
SNDKTTFDDVAKLWFEQYQNTVKPSTFLVNQNYYKTILKPHLGQLQMTKITVMICQKFVNCLSRYSGYTLYLSLANRIFK
FAVNLGIIDNNPMNKTLRSKCTYKNVDTLTKKYYTKEELNTFLRLVEAEETLEMRLIYRLLSYGGFRIGELIALKDTDFD
FRNNTISITKTIAYTKEGWAVQSPKTKKSNRTISMDAETMSLAKLYIKQSIKPLHGSFKLFNFASDTVRKRLDRFILKHG
LKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIAITMDLYTHLSKKSKDNVADKLAELVAI
>Mature_383_residues
PISYLKISTPQRKERGKTMIEKYTKKDGTTAYRLRAYLGVDPVTGKQVRTTRQGFKTEREAKRAEVKLIDDFQRQGAWKS
NDKTTFDDVAKLWFEQYQNTVKPSTFLVNQNYYKTILKPHLGQLQMTKITVMICQKFVNCLSRYSGYTLYLSLANRIFKF
AVNLGIIDNNPMNKTLRSKCTYKNVDTLTKKYYTKEELNTFLRLVEAEETLEMRLIYRLLSYGGFRIGELIALKDTDFDF
RNNTISITKTIAYTKEGWAVQSPKTKKSNRTISMDAETMSLAKLYIKQSIKPLHGSFKLFNFASDTVRKRLDRFILKHGL
KRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIAITMDLYTHLSKKSKDNVADKLAELVAI

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 44396; Mature: 44265

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISYLKISTPQRKERGKTMIEKYTKKDGTTAYRLRAYLGVDPVTGKQVRTTRQGFKTER
CCCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
EAKRAEVKLIDDFQRQGAWKSNDKTTFDDVAKLWFEQYQNTVKPSTFLVNQNYYKTILKP
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCC
HLGQLQMTKITVMICQKFVNCLSRYSGYTLYLSLANRIFKFAVNLGIIDNNPMNKTLRSK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHEEEECCCCCCHHHHHH
CTYKNVDTLTKKYYTKEELNTFLRLVEAEETLEMRLIYRLLSYGGFRIGELIALKDTDFD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCC
FRNNTISITKTIAYTKEGWAVQSPKTKKSNRTISMDAETMSLAKLYIKQSIKPLHGSFKL
CCCCEEEEEEEEEEECCCCEECCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCEEE
FNFASDTVRKRLDRFILKHGLKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIAITM
EHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEEEEEH
DLYTHLSKKSKDNVADKLAELVAI
HHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PISYLKISTPQRKERGKTMIEKYTKKDGTTAYRLRAYLGVDPVTGKQVRTTRQGFKTER
CCCEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHH
EAKRAEVKLIDDFQRQGAWKSNDKTTFDDVAKLWFEQYQNTVKPSTFLVNQNYYKTILKP
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCC
HLGQLQMTKITVMICQKFVNCLSRYSGYTLYLSLANRIFKFAVNLGIIDNNPMNKTLRSK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHEEEECCCCCCHHHHHH
CTYKNVDTLTKKYYTKEELNTFLRLVEAEETLEMRLIYRLLSYGGFRIGELIALKDTDFD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCC
FRNNTISITKTIAYTKEGWAVQSPKTKKSNRTISMDAETMSLAKLYIKQSIKPLHGSFKL
CCCCEEEEEEEEEEECCCCEECCCCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCEEE
FNFASDTVRKRLDRFILKHGLKRITPHGFRHTHASLLFEAGIPAKIAQERLGHAKIAITM
EHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEEEEEH
DLYTHLSKKSKDNVADKLAELVAI
HHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]