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The map label for this gene is nisX1 [H]

Identifier: 21910553

GI number: 21910553

Start: 1055937

End: 1056260

Strand: Direct

Name: nisX1 [H]

Synonym: SpyM3_1017

Alternate gene names: 21910553

Gene position: 1055937-1056260 (Clockwise)

Preceding gene: 21910552

Following gene: 21910555

Centisome position: 55.56

GC content: 39.2

Gene sequence:

>324_bases
ATGTCTGTCTTGATAGACGTTTATAGTAGAAAGATTGTTGGTTGGGCAATGGGCCGACGTATGCAAGACAAGTTGGTAAC
AGAAGCTTTCAATCAAGCTTATAATAGAGAAAAGCCTAAAGAAGGGGTAATCGTCCATACAGATCAGGGTTCTCAATATA
CCGGAGCACGATTTCAGGACCTACTTAGACGGAAAAAATATAAGTCCAGGATGAGTCGAAAAGGTAATCCATACGATAAT
GCACTCATGGAAGCCTTTTATATAACATTAAAAAGAGAGCTTGTCAATGATGCTCATTTCGCAACTATTGAGCAAGTGTA
CTGA

Upstream 100 bases:

>100_bases
TCGTCCCAATCTTGTTAATCAATGTTTCCAAGCGACTGCTAAGAATAAATTATAGCTAGGAGACTTAACCTACATTCCTA
CACAAGAAGGAATACTTTAT

Downstream 100 bases:

>100_bases
CCGGGGAGGTTTCTTTCTATAGTGAGCTCTGACAATAAGGTGCCAGGCTCTGCAATTCCTCAGGCGTCAGGCGCCTAAAC
TCCCCTTCTGCAAGGCTAGG

Product: putative transposase - IS904A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MSVLIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHTDQGSQYTGARFQDLLRRKKYKSRMSRKGNPYDN
ALMEAFYITLKRELVNDAHFATIEQVY

Sequences:

>Translated_107_residues
MSVLIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHTDQGSQYTGARFQDLLRRKKYKSRMSRKGNPYDN
ALMEAFYITLKRELVNDAHFATIEQVY
>Mature_106_residues
SVLIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHTDQGSQYTGARFQDLLRRKKYKSRMSRKGNPYDNA
LMEAFYITLKRELVNDAHFATIEQVY

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=95, Percent_Identity=37.8947368421053, Blast_Score=66, Evalue=8e-12,
Organism=Escherichia coli, GI1788405, Length=104, Percent_Identity=42.3076923076923, Blast_Score=97, Evalue=3e-22,
Organism=Escherichia coli, GI1787263, Length=104, Percent_Identity=42.3076923076923, Blast_Score=97, Evalue=3e-22,
Organism=Escherichia coli, GI1786753, Length=104, Percent_Identity=42.3076923076923, Blast_Score=97, Evalue=3e-22,
Organism=Escherichia coli, GI1786570, Length=104, Percent_Identity=42.3076923076923, Blast_Score=97, Evalue=3e-22,
Organism=Escherichia coli, GI1786490, Length=104, Percent_Identity=42.3076923076923, Blast_Score=97, Evalue=3e-22,
Organism=Escherichia coli, GI1789981, Length=106, Percent_Identity=33.9622641509434, Blast_Score=79, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 12583; Mature: 12451

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHTDQGSQYTGARFQD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHH
LLRRKKYKSRMSRKGNPYDNALMEAFYITLKRELVNDAHFATIEQVY
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
>Mature Secondary Structure 
SVLIDVYSRKIVGWAMGRRMQDKLVTEAFNQAYNREKPKEGVIVHTDQGSQYTGARFQD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHH
LLRRKKYKSRMSRKGNPYDNALMEAFYITLKRELVNDAHFATIEQVY
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]