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The map label for this gene is 21910484

Identifier: 21910484

GI number: 21910484

Start: 1001309

End: 1001647

Strand: Reverse

Name: 21910484

Synonym: SpyM3_0948

Alternate gene names: NA

Gene position: 1001647-1001309 (Counterclockwise)

Preceding gene: 21910485

Following gene: 21910483

Centisome position: 52.7

GC content: 38.94

Gene sequence:

>339_bases
ATGAGGCCACAGAAGTTAACCATCGCAGGTGGTAGACGTACAACAGTTGACTACGATGATAGATCAGCAGAGTATCGTGA
CTATAATCGTAATCGCTGGAAGTACGATAAACAAGCCAAACAGTTTTATAACTCAAGGATATGGAGAGAGACAAGTAAGC
AAGTATTACTTCAGAACGATTACATCTGTGCTATGTGTGGTGGCGAAGCGACTATGACTGACCACATTGTATCAGTCAAA
CAAGATTGGAACAAAAGATTAGATTGGAATAACTTGCAAGCAAGCTGTAAAGCATGTAATGATAGTAAAGCGATACGAGA
AAGACGTAAAAACAATTAA

Upstream 100 bases:

>100_bases
CGGGCCTTAGGGGCGATGAAGTTAGAGAATTGCATATCGCTCTAACTCAATATGCACTAGTCATCACACCGTGGTGGCTT
TTTATTATGGAGGTCAGGGT

Downstream 100 bases:

>100_bases
TGTAAAAACGGGTGTAAAAATTAACAACAGTATTTTAATATTCGGAAACTACCCCCCTTCATTTTTTAACGGGTCTATAT
TGTTCGGAAACTTAAGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: Phage-Related Terminase Small Subunit; Prophage Lp3 Protein

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MRPQKLTIAGGRRTTVDYDDRSAEYRDYNRNRWKYDKQAKQFYNSRIWRETSKQVLLQNDYICAMCGGEATMTDHIVSVK
QDWNKRLDWNNLQASCKACNDSKAIRERRKNN

Sequences:

>Translated_112_residues
MRPQKLTIAGGRRTTVDYDDRSAEYRDYNRNRWKYDKQAKQFYNSRIWRETSKQVLLQNDYICAMCGGEATMTDHIVSVK
QDWNKRLDWNNLQASCKACNDSKAIRERRKNN
>Mature_112_residues
MRPQKLTIAGGRRTTVDYDDRSAEYRDYNRNRWKYDKQAKQFYNSRIWRETSKQVLLQNDYICAMCGGEATMTDHIVSVK
QDWNKRLDWNNLQASCKACNDSKAIRERRKNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13401; Mature: 13401

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPQKLTIAGGRRTTVDYDDRSAEYRDYNRNRWKYDKQAKQFYNSRIWRETSKQVLLQND
CCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCC
YICAMCGGEATMTDHIVSVKQDWNKRLDWNNLQASCKACNDSKAIRERRKNN
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MRPQKLTIAGGRRTTVDYDDRSAEYRDYNRNRWKYDKQAKQFYNSRIWRETSKQVLLQND
CCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCC
YICAMCGGEATMTDHIVSVKQDWNKRLDWNNLQASCKACNDSKAIRERRKNN
CEEEEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA