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The map label for this gene is yaaJ [C]

Identifier: 21910439

GI number: 21910439

Start: 958559

End: 959881

Strand: Direct

Name: yaaJ [C]

Synonym: SpyM3_0903

Alternate gene names: 21910439

Gene position: 958559-959881 (Clockwise)

Preceding gene: 21910429

Following gene: 21910440

Centisome position: 50.44

GC content: 43.31

Gene sequence:

>1323_bases
ATGATAGCACTCGTTAAATTAATTGATAACCTTGTTTGGGGACCGCCCCTCTTAATTTTATTGGTTGGGACGGGGATTTA
CCTTACCAGTCGTTTAGGATTAATTCAAATCTTAAAACTACCAAGAGCCTTTAAACTCATTTTTTCAGATGACGAAGGAC
ATGGAGATATTTCATCCTTTGCTGCTCTTGCAACTGCCCTTGCCGCTACTGTCGGAACTGGTAACATTGTTGGGGTTGCC
ACTGCTATCAAGTCTGGTGGTCCTGGAGCGCTCTTTTGGATGTGGGTTGCCGCTTTTTTTGGAATGGCCACTAAGTACGC
TGAAGGGGTACTAGCGATTAAATACCGTACAAAGGATGCCAACGGTCATATTTCTGGTGGTCCTATGTACTATATTGTTA
ATGGCATGGGGACAAAATGGAAACCCTTAGCCATTCTTTTTGCGGGTTCAGGGATCCTAGTTGCCCTCTTTGGAATCGGA
ACCTTTGCTCAAGTGAACTCGATCACCTCGTCTTTAGGTCATAGCTTTGGCTTATCCCCACAAATGGTCAGTATTGTTTT
AGCTATCTTTGTGGCTGCCATTATTTTTGGTGGCATTCATTCCATTTCCAAAGTGGCTGAAAAAGTCGTTCCTTTTATGG
CTATTTTTTATATTCTATCTAGTTTAGCAGTTATTTTTAGTCACTACCAGCAGCTACTTCCTGTTATTCGTTTAGTCTTT
CAATCAGCCTTCACTCCGACAGCTGCTATTGGAGGCTTTGCTGGAAGTCTCATGAAGGATGCCATTCAAAAAGGAATTGC
ACGCGGTGTCTTCTCCAATGAGTCTGGACTAGGATCTGCACCTATTGCTGCAGCAGCAGCTAAAACCAATGAACCCGTGG
AGCAGGGCCTGATCTCCATGACAGGAACTTTTATTGATACGATTATTATCTGTACCCTAACCGGCCTATCTATTTTAGTA
ACAGGCCAATGGACTGGGCAGCTCGAAGGGGCTCCTCTGACCCAATCTGCCTTTGCCACTGTGTTTGGAAATTTAGGGAC
TTTTGGCCTAACCTTTTCCCTAGTTCTCTTCGCCTTTACAACGATTTTAGGATGGAGTTATTATGGAGAACGCTGCTTTG
AATTCCTCTTTGGCATTACACATCTCACCTACTTCCGTATTGTCTTTGTCTTAATGGTAGGCCTAGGAGGCTTCCTTAAG
TTAGAACTGATTTGGGTTTTGGCTGATATTGTCAATGGTTTAATGGCACTTCCTAACCTGATTGCCCTCCTAGCTCTCTC
GCCCGTTGTTATTCTAGAAACCAAGCATTACTTTATTAAGTAA

Upstream 100 bases:

>100_bases
CTTTTTTGTGTTTGCTGTTTTATCATTGCTTCAGAAGTTGTCTCAAAGAAAGAGATAGCTTTTTTCTTTTGGCGTCTTCG
ATGACTTTTAGGAGAGAAAG

Downstream 100 bases:

>100_bases
ACATGACGTTAGTACTACCCAGTTATACCTAGTCTTCTTCTGCCAAGTTCAAGAAGCTAGGCTTTTTTCTTAAGCCCCTT
TTTATGGTATAATATAAAGT

Product: Na(+)-linked D-alanine glycine permease

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVA
TAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIG
TFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVF
QSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILV
TGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFVLMVGLGGFLK
LELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK

Sequences:

>Translated_440_residues
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVA
TAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIG
TFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVF
QSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILV
TGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFVLMVGLGGFLK
LELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK
>Mature_440_residues
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSFAALATALAATVGTGNIVGVA
TAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDANGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIG
TFAQVNSITSSLGHSFGLSPQMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVF
QSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISMTGTFIDTIIICTLTGLSILV
TGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFTTILGWSYYGERCFEFLFGITHLTYFRIVFVLMVGLGGFLK
LELIWVLADIVNGLMALPNLIALLALSPVVILETKHYFIK

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=434, Percent_Identity=40.7834101382488, Blast_Score=268, Evalue=7e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 46670; Mature: 46670

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS00873 NA_ALANINE_SYMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSF
CCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHH
AALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDA
HHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCC
NGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSP
CCCCCCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCH
QMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISM
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH
TGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFT
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
TILGWSYYGERCFEFLFGITHLTYFRIVFVLMVGLGGFLKLELIWVLADIVNGLMALPNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IALLALSPVVILETKHYFIK
HHHHHHCCEEEEECCHHHCC
>Mature Secondary Structure
MIALVKLIDNLVWGPPLLILLVGTGIYLTSRLGLIQILKLPRAFKLIFSDDEGHGDISSF
CCHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCHHHEEEECCCCCCCCHHHH
AALATALAATVGTGNIVGVATAIKSGGPGALFWMWVAAFFGMATKYAEGVLAIKYRTKDA
HHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCC
NGHISGGPMYYIVNGMGTKWKPLAILFAGSGILVALFGIGTFAQVNSITSSLGHSFGLSP
CCCCCCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCH
QMVSIVLAIFVAAIIFGGIHSISKVAEKVVPFMAIFYILSSLAVIFSHYQQLLPVIRLVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSAFTPTAAIGGFAGSLMKDAIQKGIARGVFSNESGLGSAPIAAAAAKTNEPVEQGLISM
HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHH
TGTFIDTIIICTLTGLSILVTGQWTGQLEGAPLTQSAFATVFGNLGTFGLTFSLVLFAFT
HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
TILGWSYYGERCFEFLFGITHLTYFRIVFVLMVGLGGFLKLELIWVLADIVNGLMALPNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IALLALSPVVILETKHYFIK
HHHHHHCCEEEEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]