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The map label for this gene is yqjA [H]

Identifier: 21910425

GI number: 21910425

Start: 946347

End: 947303

Strand: Reverse

Name: yqjA [H]

Synonym: SpyM3_0889

Alternate gene names: 21910425

Gene position: 947303-946347 (Counterclockwise)

Preceding gene: 21910426

Following gene: 21910424

Centisome position: 49.84

GC content: 36.78

Gene sequence:

>957_bases
ATGGGTTCAGTTGAACGTACATTAAAAATGACCTTGGCTACCATTGTTGCCATTTTAATTGCTTACCAACTTCATCTGGA
TTATGCAATGTCAGCGGGGATCATTGCCCTATTAAGTGTTTTAGACACCCGTAAGTCCAGTTTGGTGGTCGCTAGGAATC
GCTTGCTATCTTTTTTCCTGGCTTTTGGGATTGCGATGATGTGCTTTAGCTTGTTTGGTTTTACGACAGTAGGTTTTATG
TGTTATTTGTTAATTATTATTCCTTTGCTCTATCACTTTCAGATAGAGGCAGGACTGGTTCCTATAACAGTACTTGTGAC
ATATTTGATTGCTAAAAAGAGTATTGCATTACCTATTTTATCGAATGAGTTTATGCTCTTTTTTGTAGGGACTAGTGTCG
CTTTACTATTTAATGCTTATATGGGTCCACAAGATCAGCAAATTCGGTACTATCACCAAAAAGTTGAATCGGATCTGAAA
GGTATCTTATACCGTTTTGAAAGTTTTCTCCTGGAAGGAAAAGGTCAAAATGAAGGGCTCTTGATCAAAAACCTTGATAA
AATATTAGATGAAGCTCTAAAACTAGTTTATCGAGAAAGGCATAATCAACTATTTCAGCAGACCAATTATCAAGTTCATT
ATTTTGAGATGCGACGACAACAAAATAGACTATTGGGACAAATGGCTATCAACGTAAACACGTTAATGAGGCAAAGTAAG
GAAAGTATTCTTTTGTCACATCTTTTTCACGAAACTGCTTGTCAGCTAAGCGAACAAAATCCGGCTTTAACCTTGATTGA
TGACATCGAACAATTGCTTGAAACCTTTCGTCATGGTGATCTTCCTCAAACTCGGGAGGAATTTGAGCGACGTGCGGTTT
TATTTCAGCTCTTACAAGACTTGGAACGTTTTATCTTATTAAAGGTAGAGTTTTATCAGGATTATCAAAATGACTAA

Upstream 100 bases:

>100_bases
AGAGGATTAACAGATTATCATCGTAAACTCAATCGAGCAGAACAGGAGTGGGAATATATTCAGAATGAAATTCAAAAAGG
ATTAGGTTAGGAGTCTTGTC

Downstream 100 bases:

>100_bases
ATCTCTATTGCACACTTCTTATCTATGACAGCTTGGGACTTAACTTCCTGAGCTTTTTTGCTATAATAAAAACAAGAATC
TCAGAATGGAGACAAGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MGSVERTLKMTLATIVAILIAYQLHLDYAMSAGIIALLSVLDTRKSSLVVARNRLLSFFLAFGIAMMCFSLFGFTTVGFM
CYLLIIIPLLYHFQIEAGLVPITVLVTYLIAKKSIALPILSNEFMLFFVGTSVALLFNAYMGPQDQQIRYYHQKVESDLK
GILYRFESFLLEGKGQNEGLLIKNLDKILDEALKLVYRERHNQLFQQTNYQVHYFEMRRQQNRLLGQMAINVNTLMRQSK
ESILLSHLFHETACQLSEQNPALTLIDDIEQLLETFRHGDLPQTREEFERRAVLFQLLQDLERFILLKVEFYQDYQND

Sequences:

>Translated_318_residues
MGSVERTLKMTLATIVAILIAYQLHLDYAMSAGIIALLSVLDTRKSSLVVARNRLLSFFLAFGIAMMCFSLFGFTTVGFM
CYLLIIIPLLYHFQIEAGLVPITVLVTYLIAKKSIALPILSNEFMLFFVGTSVALLFNAYMGPQDQQIRYYHQKVESDLK
GILYRFESFLLEGKGQNEGLLIKNLDKILDEALKLVYRERHNQLFQQTNYQVHYFEMRRQQNRLLGQMAINVNTLMRQSK
ESILLSHLFHETACQLSEQNPALTLIDDIEQLLETFRHGDLPQTREEFERRAVLFQLLQDLERFILLKVEFYQDYQND
>Mature_317_residues
GSVERTLKMTLATIVAILIAYQLHLDYAMSAGIIALLSVLDTRKSSLVVARNRLLSFFLAFGIAMMCFSLFGFTTVGFMC
YLLIIIPLLYHFQIEAGLVPITVLVTYLIAKKSIALPILSNEFMLFFVGTSVALLFNAYMGPQDQQIRYYHQKVESDLKG
ILYRFESFLLEGKGQNEGLLIKNLDKILDEALKLVYRERHNQLFQQTNYQVHYFEMRRQQNRLLGQMAINVNTLMRQSKE
SILLSHLFHETACQLSEQNPALTLIDDIEQLLETFRHGDLPQTREEFERRAVLFQLLQDLERFILLKVEFYQDYQND

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343
- InterPro:   IPR021062 [H]

Pfam domain/function: PF06081 DUF939; PF11728 DUF939_C [H]

EC number: NA

Molecular weight: Translated: 36904; Mature: 36773

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSVERTLKMTLATIVAILIAYQLHLDYAMSAGIIALLSVLDTRKSSLVVARNRLLSFFL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFGIAMMCFSLFGFTTVGFMCYLLIIIPLLYHFQIEAGLVPITVLVTYLIAKKSIALPIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEE
SNEFMLFFVGTSVALLFNAYMGPQDQQIRYYHQKVESDLKGILYRFESFLLEGKGQNEGL
CCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LIKNLDKILDEALKLVYRERHNQLFQQTNYQVHYFEMRRQQNRLLGQMAINVNTLMRQSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESILLSHLFHETACQLSEQNPALTLIDDIEQLLETFRHGDLPQTREEFERRAVLFQLLQD
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LERFILLKVEFYQDYQND
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GSVERTLKMTLATIVAILIAYQLHLDYAMSAGIIALLSVLDTRKSSLVVARNRLLSFFL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFGIAMMCFSLFGFTTVGFMCYLLIIIPLLYHFQIEAGLVPITVLVTYLIAKKSIALPIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEE
SNEFMLFFVGTSVALLFNAYMGPQDQQIRYYHQKVESDLKGILYRFESFLLEGKGQNEGL
CCCEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LIKNLDKILDEALKLVYRERHNQLFQQTNYQVHYFEMRRQQNRLLGQMAINVNTLMRQSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESILLSHLFHETACQLSEQNPALTLIDDIEQLLETFRHGDLPQTREEFERRAVLFQLLQD
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
LERFILLKVEFYQDYQND
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]