Definition | Streptococcus pyogenes MGAS315 chromosome, complete genome. |
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Accession | NC_004070 |
Length | 1,900,521 |
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The map label for this gene is ciaR [H]
Identifier: 21910410
GI number: 21910410
Start: 931229
End: 931903
Strand: Reverse
Name: ciaR [H]
Synonym: SpyM3_0874
Alternate gene names: 21910410
Gene position: 931903-931229 (Counterclockwise)
Preceding gene: 21910411
Following gene: 21910409
Centisome position: 49.03
GC content: 32.0
Gene sequence:
>675_bases ATGATAAAAATATTATTAGTAGAAGATGACTTGAGCTTATCAAATTCCATTTTTGATTTTTTAGATGATTTTGCAGACGT CATGCAAGTTTTTGATGGCGATGAAGGTTTATACGAAGCAGAAAGTGGTATTTATGATTTGATTTTGTTAGACCTTATGT TGCCGGAGAAAAATGGCTTTCAAGTCTTAAAAGAATTGCGAGAAAAAGATATTAAAATTCCTGTGTTGATCATGACAGCT AAAGAGGGTTTAGATGATAAAGGTCACGGATTTGAATTAGGTGCTGATGATTATCTGACAAAGCCGTTCTATTTAGAAGA GTTAAAAATGCGAATTCAAGCACTGTTAAAAAGAACAGGGAAATTTGCAGATAAAAATATTAGTTTTGGCAATTTAGTGG TCGACTTAGCTCGAAAAGAGGTGAAGGTTGAAGGGAAAGTAGTTGAATTACTTGGCAAAGAATTTGATTTGTTGGTGTAT CTTTTGCAAAATCAAAACGTTATTTTACCAAAGACACAAATTTTTGATCGTTTATGGGGATTCGATAGTGATACTACGAT TTCGGTTGTTGAAGTTTACATTTCTAAAATAAGGAAAAAATTAAAAGGTACCCGTTTTGTTAACAGGCTTCAAACTTTAA GAAGCGTAGGGTATATTCTAAAAAACAATGAATAA
Upstream 100 bases:
>100_bases AGCTTTTTGTAGTATAGTCTCGTTAGAAATTGTTATCAGAAATGAGACTAAGTTAAATGAAGTGATAGTTACTTTATTTA AGAACAATTGAGGTAGAGAC
Downstream 100 bases:
>100_bases ATTAAAAAAAGAGATTTTATCAGATAACTATAACCACTTTTTTCATTTTTTTGCGGTTTTTACAGGTATTTTTGTCATTA TGACTATTATTATCTTACAG
Product: putative DNA-binding response regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MIKILLVEDDLSLSNSIFDFLDDFADVMQVFDGDEGLYEAESGIYDLILLDLMLPEKNGFQVLKELREKDIKIPVLIMTA KEGLDDKGHGFELGADDYLTKPFYLEELKMRIQALLKRTGKFADKNISFGNLVVDLARKEVKVEGKVVELLGKEFDLLVY LLQNQNVILPKTQIFDRLWGFDSDTTISVVEVYISKIRKKLKGTRFVNRLQTLRSVGYILKNNE
Sequences:
>Translated_224_residues MIKILLVEDDLSLSNSIFDFLDDFADVMQVFDGDEGLYEAESGIYDLILLDLMLPEKNGFQVLKELREKDIKIPVLIMTA KEGLDDKGHGFELGADDYLTKPFYLEELKMRIQALLKRTGKFADKNISFGNLVVDLARKEVKVEGKVVELLGKEFDLLVY LLQNQNVILPKTQIFDRLWGFDSDTTISVVEVYISKIRKKLKGTRFVNRLQTLRSVGYILKNNE >Mature_224_residues MIKILLVEDDLSLSNSIFDFLDDFADVMQVFDGDEGLYEAESGIYDLILLDLMLPEKNGFQVLKELREKDIKIPVLIMTA KEGLDDKGHGFELGADDYLTKPFYLEELKMRIQALLKRTGKFADKNISFGNLVVDLARKEVKVEGKVVELLGKEFDLLVY LLQNQNVILPKTQIFDRLWGFDSDTTISVVEVYISKIRKKLKGTRFVNRLQTLRSVGYILKNNE
Specific function: Member of the two-component regulatory system CiaH/CiaR. Involved in early steps of competence regulation and in penicillin susceptibility [H]
COG id: COG0745
COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=36.7713004484305, Blast_Score=142, Evalue=1e-35, Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=34.2342342342342, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1790552, Length=224, Percent_Identity=35.2678571428571, Blast_Score=134, Evalue=3e-33, Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=33.9449541284404, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=29.4117647058824, Blast_Score=121, Evalue=3e-29, Organism=Escherichia coli, GI1786911, Length=207, Percent_Identity=32.3671497584541, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1786599, Length=221, Percent_Identity=31.6742081447964, Blast_Score=110, Evalue=5e-26, Organism=Escherichia coli, GI1790860, Length=223, Percent_Identity=29.1479820627803, Blast_Score=100, Evalue=5e-23, Organism=Escherichia coli, GI2367329, Length=231, Percent_Identity=33.7662337662338, Blast_Score=99, Evalue=2e-22, Organism=Escherichia coli, GI1788394, Length=205, Percent_Identity=30.2439024390244, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=29.8245614035088, Blast_Score=92, Evalue=4e-20, Organism=Escherichia coli, GI1790863, Length=212, Percent_Identity=30.188679245283, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1787229, Length=210, Percent_Identity=27.6190476190476, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI145693140, Length=238, Percent_Identity=28.9915966386555, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1790437, Length=119, Percent_Identity=31.9327731092437, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1788550, Length=72, Percent_Identity=37.5, Blast_Score=61, Evalue=5e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 25704; Mature: 25704
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKILLVEDDLSLSNSIFDFLDDFADVMQVFDGDEGLYEAESGIYDLILLDLMLPEKNGF CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHCCCCCCH QVLKELREKDIKIPVLIMTAKEGLDDKGHGFELGADDYLTKPFYLEELKMRIQALLKRTG HHHHHHHHCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHC KFADKNISFGNLVVDLARKEVKVEGKVVELLGKEFDLLVYLLQNQNVILPKTQIFDRLWG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCEECCHHHHHHHHHC FDSDTTISVVEVYISKIRKKLKGTRFVNRLQTLRSVGYILKNNE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIKILLVEDDLSLSNSIFDFLDDFADVMQVFDGDEGLYEAESGIYDLILLDLMLPEKNGF CEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHCCCCCCH QVLKELREKDIKIPVLIMTAKEGLDDKGHGFELGADDYLTKPFYLEELKMRIQALLKRTG HHHHHHHHCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHC KFADKNISFGNLVVDLARKEVKVEGKVVELLGKEFDLLVYLLQNQNVILPKTQIFDRLWG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEECCCCEECCHHHHHHHHHC FDSDTTISVVEVYISKIRKKLKGTRFVNRLQTLRSVGYILKNNE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11463916 [H]