Definition | Streptococcus pyogenes MGAS315 chromosome, complete genome. |
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Accession | NC_004070 |
Length | 1,900,521 |
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The map label for this gene is ydhC [H]
Identifier: 21910363
GI number: 21910363
Start: 880633
End: 881328
Strand: Reverse
Name: ydhC [H]
Synonym: SpyM3_0827
Alternate gene names: 21910363
Gene position: 881328-880633 (Counterclockwise)
Preceding gene: 21910364
Following gene: 21910362
Centisome position: 46.37
GC content: 35.49
Gene sequence:
>696_bases ATGAATCCTATTATCGAAGCCGTTAAACAAAATCTTGACCTATCAAGAAATCTCCCTTTGAAAATAGCCTTTTATAACGC TCTTAAAAAGACCATTATTTTGCGACAAATTCCTGTTGGAAGCCGCATTAATGAAAAAGAGTTTTCCATTGCGCTTAATA TTAGCAGGACACCTATTCGCTACGCTTTGGGATTATTGTCTGAAGAACACCTTGTAGAGCACATTCCTAAAAAAGGCATT ATTGTCAAAGGAGTTAGTATCAAGGATGCCTGTGAAATTTTTGAAATTCGAAAAGCTCTAGAGACTCTCGCAACAGTGCA AGCGATGCATTTAATGACAGAAGAAGATTTTAAAGTTATGCATAACTTGTTGGAAGACTGTGAAACCTTTATCGCAGAGG ATGACACCAATCGTATTTTGGATAATTTTAATGCCTTTAACAATTTGATTTACAGCTATAGCCAAATGGTCCGCTTAAAA GAAATTGTGACAGAATTGCAAACTTATTTGGTCTACTTTAGAAAAATTTCGATTTCTTCAGTTGAACGCCGTAAACGAGC TCTATCTGAACACTGGATGATTTACCGAGGTATGAAGAACAAAGATCATGAGCAAATTACGTTGATTACACATGAACACT TGAATAGCTCACTTGAATTTATCTTAAAAGAAATGAGGCCTGAGCAAAATGACTAA
Upstream 100 bases:
>100_bases GTGAGCATGGCTTTAATTTTTCAGAACTCATCTAGTCCTATTGGAATGTTTCACAAATTTAAGTATAATAAAGTGAGGAC ACTAGCATTAAGGAGATGAC
Downstream 100 bases:
>100_bases GGCAGTTCTAACAAGTATTAGTCAACTGGCCTTAAAAGCTTTGCTTTATGAAGTCTCACTATCTCCAAAACCTGGTTTAG TTGATCGATTTGATAACGGT
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MNPIIEAVKQNLDLSRNLPLKIAFYNALKKTIILRQIPVGSRINEKEFSIALNISRTPIRYALGLLSEEHLVEHIPKKGI IVKGVSIKDACEIFEIRKALETLATVQAMHLMTEEDFKVMHNLLEDCETFIAEDDTNRILDNFNAFNNLIYSYSQMVRLK EIVTELQTYLVYFRKISISSVERRKRALSEHWMIYRGMKNKDHEQITLITHEHLNSSLEFILKEMRPEQND
Sequences:
>Translated_231_residues MNPIIEAVKQNLDLSRNLPLKIAFYNALKKTIILRQIPVGSRINEKEFSIALNISRTPIRYALGLLSEEHLVEHIPKKGI IVKGVSIKDACEIFEIRKALETLATVQAMHLMTEEDFKVMHNLLEDCETFIAEDDTNRILDNFNAFNNLIYSYSQMVRLK EIVTELQTYLVYFRKISISSVERRKRALSEHWMIYRGMKNKDHEQITLITHEHLNSSLEFILKEMRPEQND >Mature_231_residues MNPIIEAVKQNLDLSRNLPLKIAFYNALKKTIILRQIPVGSRINEKEFSIALNISRTPIRYALGLLSEEHLVEHIPKKGI IVKGVSIKDACEIFEIRKALETLATVQAMHLMTEEDFKVMHNLLEDCETFIAEDDTNRILDNFNAFNNLIYSYSQMVRLK EIVTELQTYLVYFRKISISSVERRKRALSEHWMIYRGMKNKDHEQITLITHEHLNSSLEFILKEMRPEQND
Specific function: Unknown
COG id: COG1802
COG function: function code K; Transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787821, Length=213, Percent_Identity=22.5352112676056, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011711 - InterPro: IPR000485 - InterPro: IPR000524 - InterPro: IPR011991 [H]
Pfam domain/function: PF07729 FCD; PF00392 GntR [H]
EC number: NA
Molecular weight: Translated: 27031; Mature: 27031
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS50949 HTH_GNTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPIIEAVKQNLDLSRNLPLKIAFYNALKKTIILRQIPVGSRINEKEFSIALNISRTPIR CCHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHH YALGLLSEEHLVEHIPKKGIIVKGVSIKDACEIFEIRKALETLATVQAMHLMTEEDFKVM HHHHHHCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNLLEDCETFIAEDDTNRILDNFNAFNNLIYSYSQMVRLKEIVTELQTYLVYFRKISISS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VERRKRALSEHWMIYRGMKNKDHEQITLITHEHLNSSLEFILKEMRPEQND HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNPIIEAVKQNLDLSRNLPLKIAFYNALKKTIILRQIPVGSRINEKEFSIALNISRTPIR CCHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCHHH YALGLLSEEHLVEHIPKKGIIVKGVSIKDACEIFEIRKALETLATVQAMHLMTEEDFKVM HHHHHHCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HNLLEDCETFIAEDDTNRILDNFNAFNNLIYSYSQMVRLKEIVTELQTYLVYFRKISISS HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VERRKRALSEHWMIYRGMKNKDHEQITLITHEHLNSSLEFILKEMRPEQND HHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9202461; 9384377 [H]