Definition | Streptococcus pyogenes MGAS315 chromosome, complete genome. |
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Accession | NC_004070 |
Length | 1,900,521 |
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The map label for this gene is hlyIII [C]
Identifier: 21910351
GI number: 21910351
Start: 868597
End: 869247
Strand: Reverse
Name: hlyIII [C]
Synonym: SpyM3_0815
Alternate gene names: 21910351
Gene position: 869247-868597 (Counterclockwise)
Preceding gene: 21910352
Following gene: 21910350
Centisome position: 45.74
GC content: 37.63
Gene sequence:
>651_bases ATGAACCAAACCTTTAAACAAAGTTTACCCTTATCTTTTAGTGAGGAAGTAGCAAACAGCGTGACACACGCTATCGGAGC ATTTGCTATGCTCATTCTACTTCCTATTTCAGCCAGCTATGCTTATCAAACTTATGACCTTAAAGCCGCTATTGGTATCT CCATCTTTGTCATCAGTCTCTTTTTGATGTTTTTGTCCTCTACGATTTACCACTCCATGGCTTATGGTTCGGTTCACAAA TACATTCTACGCATTATTGATCACAGTATGATTTACATTGCTATCGCAGGAAGTTATACACCTGTTGCCTTATCCCTTGT TTCTGGTTGGCTAGGCTATATCATTATTGTTTTGCAGTGGGGCATTACGCTTTTTGGGATTTTATACAAAATTTTTGCTA AACGTATCAATGAAAAATTCAGTTTGATGCTTTATATCGTTATGGGCTGGCTCGTTGTGTTTATCTTGCCAGTCATCATT CAAAAAACTAGTCTTGCTTTTGGTCTTCTCATGTTATTTGGTGGCTTGTCTTATACCATTGGAGCGGTATTTTATGCCAA AAAAAGACCCTACTTCCACATGATTTGGCATCTCTTTATTTTATTGGCCTCTGCCCTCCAATTTATCGCTATCACTTTCT TTATGCTTTAA
Upstream 100 bases:
>100_bases AGGCTCCCATTGAGGAGGACATTCCACCGATTGTGCAGGTTGCCTGTCAAACGGTCAAAGATTACCACAAAACTATTTAT TTATTACAGGAGGTGACCCA
Downstream 100 bases:
>100_bases GATAAATAGATGCTCAGACTGATTGAAAGGCTTAATGTGATGAGTTGGTGTAAGACATCAATTCTTAGAAGTGGTATAAT GGATAGCAAGTAATAAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MNQTFKQSLPLSFSEEVANSVTHAIGAFAMLILLPISASYAYQTYDLKAAIGISIFVISLFLMFLSSTIYHSMAYGSVHK YILRIIDHSMIYIAIAGSYTPVALSLVSGWLGYIIIVLQWGITLFGILYKIFAKRINEKFSLMLYIVMGWLVVFILPVII QKTSLAFGLLMLFGGLSYTIGAVFYAKKRPYFHMIWHLFILLASALQFIAITFFML
Sequences:
>Translated_216_residues MNQTFKQSLPLSFSEEVANSVTHAIGAFAMLILLPISASYAYQTYDLKAAIGISIFVISLFLMFLSSTIYHSMAYGSVHK YILRIIDHSMIYIAIAGSYTPVALSLVSGWLGYIIIVLQWGITLFGILYKIFAKRINEKFSLMLYIVMGWLVVFILPVII QKTSLAFGLLMLFGGLSYTIGAVFYAKKRPYFHMIWHLFILLASALQFIAITFFML >Mature_216_residues MNQTFKQSLPLSFSEEVANSVTHAIGAFAMLILLPISASYAYQTYDLKAAIGISIFVISLFLMFLSSTIYHSMAYGSVHK YILRIIDHSMIYIAIAGSYTPVALSLVSGWLGYIIIVLQWGITLFGILYKIFAKRINEKFSLMLYIVMGWLVVFILPVII QKTSLAFGLLMLFGGLSYTIGAVFYAKKRPYFHMIWHLFILLASALQFIAITFFML
Specific function: Unknown
COG id: COG1272
COG function: function code R; Predicted membrane protein, hemolysin III homolog
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0073 (Hly-III) family [H]
Homologues:
Organism=Homo sapiens, GI154759275, Length=214, Percent_Identity=27.5700934579439, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1789266, Length=212, Percent_Identity=35.377358490566, Blast_Score=111, Evalue=5e-26, Organism=Caenorhabditis elegans, GI71996356, Length=220, Percent_Identity=31.3636363636364, Blast_Score=67, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004254 - InterPro: IPR005744 [H]
Pfam domain/function: PF03006 HlyIII [H]
EC number: NA
Molecular weight: Translated: 24391; Mature: 24391
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQTFKQSLPLSFSEEVANSVTHAIGAFAMLILLPISASYAYQTYDLKAAIGISIFVISL CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH FLMFLSSTIYHSMAYGSVHKYILRIIDHSMIYIAIAGSYTPVALSLVSGWLGYIIIVLQW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH GITLFGILYKIFAKRINEKFSLMLYIVMGWLVVFILPVIIQKTSLAFGLLMLFGGLSYTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GAVFYAKKRPYFHMIWHLFILLASALQFIAITFFML HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNQTFKQSLPLSFSEEVANSVTHAIGAFAMLILLPISASYAYQTYDLKAAIGISIFVISL CCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH FLMFLSSTIYHSMAYGSVHKYILRIIDHSMIYIAIAGSYTPVALSLVSGWLGYIIIVLQW HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH GITLFGILYKIFAKRINEKFSLMLYIVMGWLVVFILPVIIQKTSLAFGLLMLFGGLSYTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH GAVFYAKKRPYFHMIWHLFILLASALQFIAITFFML HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]