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The map label for this gene is ywkD [H]

Identifier: 21910348

GI number: 21910348

Start: 866118

End: 866531

Strand: Direct

Name: ywkD [H]

Synonym: SpyM3_0812

Alternate gene names: 21910348

Gene position: 866118-866531 (Clockwise)

Preceding gene: 21910347

Following gene: 21910349

Centisome position: 45.57

GC content: 35.99

Gene sequence:

>414_bases
ATGAAACTAAATGCCATTCATCACGTTGCTATTATTGTATCTGATTATAATCTGTCAAAAAATTTTTATGTGAATAAACT
CGGATTTGAAATTATCAGAGAAAATTATCGTCCTGACAGGCATGATTACAAATTAGATTTATCTTGTGGTCGTATTGAAT
TGGAGATTTTTGGTAAGGTGACAAGTGACCCCTACTATCAAGCTCCTCCTAAACGTGTAAGTCAACCAGAATTTAAAAGT
GAGGCCTGTGGTTTGAGGCACCTTGCTTTTCGTGTTACCAACATTGAGAGTTATGTAGATGATCTAAAGAGCTTAGGAAT
TCCAGTGGAGCCTATCAGGCATGATGATTACACAGGTGAGAAAATGACTTTCTTTTTTGATCCGGATGGTTTGCCTTTAG
AATTACATGAATAG

Upstream 100 bases:

>100_bases
AACCAAGTATCTACCTAGATATATCTTAAATATAATATTTAAAAAGTAGGACCATAGAGAAAATTTATCTCAGCCTACTT
TTTTTGAAAGGAGAAATATG

Downstream 100 bases:

>100_bases
ACTTATTAGGTTAACGACTGGATCGTGCTATTAAACTCGTTAAAAATAGTTATTTGTTGCATCTTCTTTTGCTTGATTAA
TCTCTTTTGATCGTTAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKLNAIHHVAIIVSDYNLSKNFYVNKLGFEIIRENYRPDRHDYKLDLSCGRIELEIFGKVTSDPYYQAPPKRVSQPEFKS
EACGLRHLAFRVTNIESYVDDLKSLGIPVEPIRHDDYTGEKMTFFFDPDGLPLELHE

Sequences:

>Translated_137_residues
MKLNAIHHVAIIVSDYNLSKNFYVNKLGFEIIRENYRPDRHDYKLDLSCGRIELEIFGKVTSDPYYQAPPKRVSQPEFKS
EACGLRHLAFRVTNIESYVDDLKSLGIPVEPIRHDDYTGEKMTFFFDPDGLPLELHE
>Mature_137_residues
MKLNAIHHVAIIVSDYNLSKNFYVNKLGFEIIRENYRPDRHDYKLDLSCGRIELEIFGKVTSDPYYQAPPKRVSQPEFKS
EACGLRHLAFRVTNIESYVDDLKSLGIPVEPIRHDDYTGEKMTFFFDPDGLPLELHE

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081697, Length=138, Percent_Identity=47.8260869565217, Blast_Score=114, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 15948; Mature: 15948

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: PS00934 GLYOXALASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNAIHHVAIIVSDYNLSKNFYVNKLGFEIIRENYRPDRHDYKLDLSCGRIELEIFGKV
CCCCCEEEEEEEEECCCCCCCEEEEHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEE
TSDPYYQAPPKRVSQPEFKSEACGLRHLAFRVTNIESYVDDLKSLGIPVEPIRHDDYTGE
CCCCCCCCCCCCCCCCCCCCHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCC
KMTFFFDPDGLPLELHE
EEEEEECCCCCEEEECC
>Mature Secondary Structure
MKLNAIHHVAIIVSDYNLSKNFYVNKLGFEIIRENYRPDRHDYKLDLSCGRIELEIFGKV
CCCCCEEEEEEEEECCCCCCCEEEEHHHHHHHHHCCCCCCCCEEEECCCCEEEEEEEEEE
TSDPYYQAPPKRVSQPEFKSEACGLRHLAFRVTNIESYVDDLKSLGIPVEPIRHDDYTGE
CCCCCCCCCCCCCCCCCCCCHHCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCC
KMTFFFDPDGLPLELHE
EEEEEECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]