Definition | Streptococcus pyogenes MGAS315 chromosome, complete genome. |
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Accession | NC_004070 |
Length | 1,900,521 |
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The map label for this gene is ldh [H]
Identifier: 21910345
GI number: 21910345
Start: 861606
End: 862589
Strand: Reverse
Name: ldh [H]
Synonym: SpyM3_0809
Alternate gene names: 21910345
Gene position: 862589-861606 (Counterclockwise)
Preceding gene: 21910350
Following gene: 21910333
Centisome position: 45.39
GC content: 40.85
Gene sequence:
>984_bases ATGACTGCAACTAAACAACACAAAAAAGTAATCTTGGTCGGTGATGGTGCCGTCGGTTCATCATACGCTTTTGCATTGGT AACACAAAATATTGCTCAAGAACTTGGTATTATTGATATTTTTAAAGAAAAAACTCAAGGAGATGCAGAAGATTTAAGCC ACGCTCTAGCTTTTACATCACCTAAAAAAATCTATGCAGCTGACTACTCAGACTGTCATGATGCTGATCTTGTTGTCTTA ACAGCTGGTGCTCCTCAAAAACCAGGTGAAACACGCCTTGACCTTGTTGAAAAAAACCTTCGTATCAATAAAGAGGTTGT TACACAAATCGTTGCATCTGGTTTCAAAGGAATCTTTCTTGTTGCTGCTAACCCAGTTGACGTTTTGACTTACTCAACAT GGAAATTCTCAGGTTTCCCTAAAGAGCGTGTCATTGGTTCAGGTACATCTCTAGATTCAGCCCGTTTCCGTCAAGCTCTG GCTGCTAAAATCGGTGTTGATGCGCGTTCGGTTCACGCTTACATCATGGGAGAACACGGTGACTCTGAATTTGCTGTTTG GTCACACGCTAACGTTGCTGGTGTAGGTCTTTACGACTGGCTCCAAGCTAATCGTGACATTGATGAGCAAGGCCTAGTTG ATCTTTTCATTTCTGTACGTGATGCTGCTTACTCAATCATCAATAAAAAAGGTGCTACTTTCTACGGTATTGCAGTTGCC CTAGCTCGTATTACAAAAGCTATTCTTGATGATGAAAATGCTGTTCTTCCGCTTTCTGTTTTCCAAGAAGGCCAATACGA AGGTGTTGAAGATTGCTATATTGGTCAACCAGCTATCGTTGGAGCGTATGGAATTGTTCGTCCAGTAAACATTCCACTTA ACGATGCTGAATTGCAAAAAATGCAAGCCTCTGCAAATCAATTGAAAGCTATCATTGATGAAGCCTTTGCTAAGGAAGAA TTTGCTTCTGCTGCTAAAAACTAA
Upstream 100 bases:
>100_bases TTTTCATTATTTTTCTGAATTCAATGACAAACAATTATCAATATGTTAAAATAAGACCGTATGAGCTTTTGCTCTAATAA AATTAAGGAGATGTTTAGAA
Downstream 100 bases:
>100_bases TCACAAAAGAGACTTCGGTCTCTTTTTGTTTTGCCTGATATTCCTTTTCCAACGTGCTATAAGAGGATAATCATAAGTTT AGAACTTTTCAGGTTGCAAC
Product: L-lactate dehydrogenase
Products: NA
Alternate protein names: L-LDH [H]
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MTATKQHKKVILVGDGAVGSSYAFALVTQNIAQELGIIDIFKEKTQGDAEDLSHALAFTSPKKIYAADYSDCHDADLVVL TAGAPQKPGETRLDLVEKNLRINKEVVTQIVASGFKGIFLVAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQAL AAKIGVDARSVHAYIMGEHGDSEFAVWSHANVAGVGLYDWLQANRDIDEQGLVDLFISVRDAAYSIINKKGATFYGIAVA LARITKAILDDENAVLPLSVFQEGQYEGVEDCYIGQPAIVGAYGIVRPVNIPLNDAELQKMQASANQLKAIIDEAFAKEE FASAAKN
Sequences:
>Translated_327_residues MTATKQHKKVILVGDGAVGSSYAFALVTQNIAQELGIIDIFKEKTQGDAEDLSHALAFTSPKKIYAADYSDCHDADLVVL TAGAPQKPGETRLDLVEKNLRINKEVVTQIVASGFKGIFLVAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQAL AAKIGVDARSVHAYIMGEHGDSEFAVWSHANVAGVGLYDWLQANRDIDEQGLVDLFISVRDAAYSIINKKGATFYGIAVA LARITKAILDDENAVLPLSVFQEGQYEGVEDCYIGQPAIVGAYGIVRPVNIPLNDAELQKMQASANQLKAIIDEAFAKEE FASAAKN >Mature_326_residues TATKQHKKVILVGDGAVGSSYAFALVTQNIAQELGIIDIFKEKTQGDAEDLSHALAFTSPKKIYAADYSDCHDADLVVLT AGAPQKPGETRLDLVEKNLRINKEVVTQIVASGFKGIFLVAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQALA AKIGVDARSVHAYIMGEHGDSEFAVWSHANVAGVGLYDWLQANRDIDEQGLVDLFISVRDAAYSIINKKGATFYGIAVAL ARITKAILDDENAVLPLSVFQEGQYEGVEDCYIGQPAIVGAYGIVRPVNIPLNDAELQKMQASANQLKAIIDEAFAKEEF ASAAKN
Specific function: Catalyzes The Reversible Oxidation Of Malate To Oxaloacetate. [C]
COG id: COG0039
COG function: function code C; Malate/lactate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LDH/MDH superfamily. LDH family [H]
Homologues:
Organism=Homo sapiens, GI291575128, Length=308, Percent_Identity=38.6363636363636, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI4557032, Length=308, Percent_Identity=38.6363636363636, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI47059044, Length=314, Percent_Identity=38.8535031847134, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI221136809, Length=314, Percent_Identity=38.8535031847134, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI15082234, Length=311, Percent_Identity=37.9421221864952, Blast_Score=224, Evalue=7e-59, Organism=Homo sapiens, GI5031857, Length=311, Percent_Identity=37.9421221864952, Blast_Score=224, Evalue=7e-59, Organism=Homo sapiens, GI260099723, Length=311, Percent_Identity=37.9421221864952, Blast_Score=224, Evalue=8e-59, Organism=Homo sapiens, GI9257228, Length=302, Percent_Identity=39.4039735099338, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI4504973, Length=302, Percent_Identity=39.4039735099338, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI260099727, Length=192, Percent_Identity=44.7916666666667, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI260099725, Length=192, Percent_Identity=44.7916666666667, Blast_Score=185, Evalue=6e-47, Organism=Homo sapiens, GI207028494, Length=196, Percent_Identity=38.7755102040816, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI103472011, Length=308, Percent_Identity=24.025974025974, Blast_Score=108, Evalue=6e-24, Organism=Homo sapiens, GI103472015, Length=184, Percent_Identity=29.3478260869565, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI21735621, Length=338, Percent_Identity=25.4437869822485, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17535107, Length=292, Percent_Identity=42.4657534246575, Blast_Score=228, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17554310, Length=260, Percent_Identity=27.6923076923077, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI17136226, Length=302, Percent_Identity=38.0794701986755, Blast_Score=218, Evalue=6e-57, Organism=Drosophila melanogaster, GI45550422, Length=316, Percent_Identity=31.0126582278481, Blast_Score=160, Evalue=8e-40, Organism=Drosophila melanogaster, GI24647881, Length=331, Percent_Identity=26.8882175226586, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: 2640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2380 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001557 - InterPro: IPR011304 - InterPro: IPR018177 - InterPro: IPR022383 - InterPro: IPR001236 - InterPro: IPR015955 - InterPro: IPR016040 [H]
Pfam domain/function: PF02866 Ldh_1_C; PF00056 Ldh_1_N [H]
EC number: =1.1.1.27 [H]
Molecular weight: Translated: 35272; Mature: 35141
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00064 L_LDH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATKQHKKVILVGDGAVGSSYAFALVTQNIAQELGIIDIFKEKTQGDAEDLSHALAFTS CCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCC PKKIYAADYSDCHDADLVVLTAGAPQKPGETRLDLVEKNLRINKEVVTQIVASGFKGIFL CCEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEE VAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQALAAKIGVDARSVHAYIMGEHG EECCCCCEEEEECEEECCCCHHHEECCCCCCCHHHHHHHHHHHHCCCHHEEEEEEEECCC DSEFAVWSHANVAGVGLYDWLQANRDIDEQGLVDLFISVRDAAYSIINKKGATFYGIAVA CCCEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LARITKAILDDENAVLPLSVFQEGQYEGVEDCYIGQPAIVGAYGIVRPVNIPLNDAELQK HHHHHHHHHCCCCCEEEHHHHCCCCCCCCCHHCCCCCHHEECCCCEEECCCCCCHHHHHH MQASANQLKAIIDEAFAKEEFASAAKN HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TATKQHKKVILVGDGAVGSSYAFALVTQNIAQELGIIDIFKEKTQGDAEDLSHALAFTS CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHCCC PKKIYAADYSDCHDADLVVLTAGAPQKPGETRLDLVEKNLRINKEVVTQIVASGFKGIFL CCEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCEEEE VAANPVDVLTYSTWKFSGFPKERVIGSGTSLDSARFRQALAAKIGVDARSVHAYIMGEHG EECCCCCEEEEECEEECCCCHHHEECCCCCCCHHHHHHHHHHHHCCCHHEEEEEEEECCC DSEFAVWSHANVAGVGLYDWLQANRDIDEQGLVDLFISVRDAAYSIINKKGATFYGIAVA CCCEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LARITKAILDDENAVLPLSVFQEGQYEGVEDCYIGQPAIVGAYGIVRPVNIPLNDAELQK HHHHHHHHHCCCCCEEEHHHHCCCCCCCCCHHCCCCCHHEECCCCEEECCCCCCHHHHHH MQASANQLKAIIDEAFAKEEFASAAKN HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA