Definition | Streptococcus pyogenes MGAS315 chromosome, complete genome. |
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Accession | NC_004070 |
Length | 1,900,521 |
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The map label for this gene is yjbM [H]
Identifier: 21910320
GI number: 21910320
Start: 837351
End: 838022
Strand: Direct
Name: yjbM [H]
Synonym: SpyM3_0784
Alternate gene names: 21910320
Gene position: 837351-838022 (Clockwise)
Preceding gene: 21910313
Following gene: 21910321
Centisome position: 44.06
GC content: 35.71
Gene sequence:
>672_bases ATGACCTTAGATTGGGAAGAATTTTTAGATCCTTATATCCAAACAGTTGGTGAATTAAAAATAAAACTACGGGGTATTCG CAAGCAATATCGTAAGCAAAATCGTTATTCTCCGATTGAATTTGTTACGGGACGTGTTAAGTCAATTGAAAGTATTAAAG AAAAAATGATTTTACGTGGTGTTATTGAAGAAAATATAGCACAAGATATTCAAGATATTGCTGGACTACGTATTATGGTT CAGTTTGTCGATGATGTGGAAGAAGTCTTAGCTCTATTGCGTCAACGACAAGACATGACAATTGTTTATGAACGAGATTA TATTCGCAATATGAAGTCCAGTGGCTACAGGTCTTATCATGTTGTGGTTGAGTACCCTGTTGATACTATTGAAGGTCAAA AAAAGGTCTTAGCGGAGATTCAGATTCGTACTTTGGCAATGAACTTTTGGGCGACCATTGAGCATTCTTTAAATTATAAA TATGGTGGAGACTTCCCAGAAGAAATTAAAAAGCGTCTTGAAGTGACTGCTAAAATTGCTTTAGAATTAGACGAAGAAAT GCGTAAGATTCGAGAAGATATTCGGGAGGCTCAATTATTGTTTGACCCCGTGACACGAAATTTAAGTGATGGTGTAGGAA ATAGTGATGACACAGATGAATTATACAGGTAA
Upstream 100 bases:
>100_bases CTAGGTTAGTCATGGGAAATTCCTTTTAATTTGTGCTATAATAAATTGTTATTTCAATTTTATATTATTATTCTGGCTTT GACAAGAAAGGAGACAATAG
Downstream 100 bases:
>100_bases GGTAAAGCGAGTTGCTATTATTGCAAATGGTAAGTACCAAAGTAAACGCGTCGCCTCCAAACTTTTCTCCGTATTTAAAG ATGATCCTGATTTCTATCTT
Product: putative GTP pyrophosphokinase
Products: NA
Alternate protein names: (p)ppGpp synthase yjbM; Small alarmone synthase 1; SAS 1 [H]
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MTLDWEEFLDPYIQTVGELKIKLRGIRKQYRKQNRYSPIEFVTGRVKSIESIKEKMILRGVIEENIAQDIQDIAGLRIMV QFVDDVEEVLALLRQRQDMTIVYERDYIRNMKSSGYRSYHVVVEYPVDTIEGQKKVLAEIQIRTLAMNFWATIEHSLNYK YGGDFPEEIKKRLEVTAKIALELDEEMRKIREDIREAQLLFDPVTRNLSDGVGNSDDTDELYR
Sequences:
>Translated_223_residues MTLDWEEFLDPYIQTVGELKIKLRGIRKQYRKQNRYSPIEFVTGRVKSIESIKEKMILRGVIEENIAQDIQDIAGLRIMV QFVDDVEEVLALLRQRQDMTIVYERDYIRNMKSSGYRSYHVVVEYPVDTIEGQKKVLAEIQIRTLAMNFWATIEHSLNYK YGGDFPEEIKKRLEVTAKIALELDEEMRKIREDIREAQLLFDPVTRNLSDGVGNSDDTDELYR >Mature_222_residues TLDWEEFLDPYIQTVGELKIKLRGIRKQYRKQNRYSPIEFVTGRVKSIESIKEKMILRGVIEENIAQDIQDIAGLRIMVQ FVDDVEEVLALLRQRQDMTIVYERDYIRNMKSSGYRSYHVVVEYPVDTIEGQKKVLAEIQIRTLAMNFWATIEHSLNYKY GGDFPEEIKKRLEVTAKIALELDEEMRKIREDIREAQLLFDPVTRNLSDGVGNSDDTDELYR
Specific function: Functions as a (p)ppGpp synthase. In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. YjbM has probably a
COG id: COG2357
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the relA/spoT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007685 [H]
Pfam domain/function: PF04607 RelA_SpoT [H]
EC number: =2.7.6.5 [H]
Molecular weight: Translated: 26288; Mature: 26156
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDWEEFLDPYIQTVGELKIKLRGIRKQYRKQNRYSPIEFVTGRVKSIESIKEKMILRG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VIEENIAQDIQDIAGLRIMVQFVDDVEEVLALLRQRQDMTIVYERDYIRNMKSSGYRSYH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCEEE VVVEYPVDTIEGQKKVLAEIQIRTLAMNFWATIEHSLNYKYGGDFPEEIKKRLEVTAKIA EEEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH LELDEEMRKIREDIREAQLLFDPVTRNLSDGVGNSDDTDELYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC >Mature Secondary Structure TLDWEEFLDPYIQTVGELKIKLRGIRKQYRKQNRYSPIEFVTGRVKSIESIKEKMILRG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH VIEENIAQDIQDIAGLRIMVQFVDDVEEVLALLRQRQDMTIVYERDYIRNMKSSGYRSYH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCEEE VVVEYPVDTIEGQKKVLAEIQIRTLAMNFWATIEHSLNYKYGGDFPEEIKKRLEVTAKIA EEEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH LELDEEMRKIREDIREAQLLFDPVTRNLSDGVGNSDDTDELYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]