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The map label for this gene is yvdE [H]

Identifier: 21910314

GI number: 21910314

Start: 832503

End: 833198

Strand: Reverse

Name: yvdE [H]

Synonym: SpyM3_0778

Alternate gene names: 21910314

Gene position: 833198-832503 (Counterclockwise)

Preceding gene: 21910315

Following gene: 21910308

Centisome position: 43.84

GC content: 38.94

Gene sequence:

>696_bases
ATGACCAAACCGATTATTGGAATAACTGCAAATCAAAGACTAAATATGGCTTTGGATAATCTCCCATGGTCATATGCACC
TACTGGATTTGTACAGGCAGTCACTCAATCTGGGGGGCTGCCGCTTCTTTTACCCATTGGTGATGAAGCCGCCGCTAAAA
CTTATGTATCTATGGTTGATAAAATCATTTTAATTGGTGGGCAAAACGTTGACCCAAAATATTATCAAGAAGAGAAGGCT
GCTTTTGATGATGATTTTTCACCAGAGCGAGACACATTTGAGCTAGCTATCATCAAGGAGGCTATAACATTAAAAAAACC
AATCTTAGGGATTTGTCGTGGTACACAGTTAATGAATGTTGCCTTAGGAGGAAATCTTAACCAACACATTGACTCACATT
GGCAAGAAGCGCCTTCTGATTTCTTATCACACGAAATGATTATTGAGCCAGACTCTATCTTATATCCTATTTACGGTCAT
AAGACATTAATTAATTCTTTTCATCGCCAAAGTTTAAAAACTGTTGCTAAGGATTTAAAAGTAATCGCTAGAGATCCACG
TGATGGTACCATCGAAGCAGTCATATCAACCAACGATGCCATTCCTTTTTTAGGTGTTCAGTGGCATCCTGAACTTCTCC
AAGGTGTTCGAGATGAAGATCTACAATTGTTCCGCTTATTCGTCAATGACTTCTGA

Upstream 100 bases:

>100_bases
AGTTCCTAAAGGAGTTATTGTTCAATCTGTCGATTTGACCAGTGAGCTCCAGACACTACTCTATTTTATGAATCAAAATC
ATCTAGATTAAGGAGGTATA

Downstream 100 bases:

>100_bases
CTTAAAAAAGGGTTGATTTTTCTCGAAAACTATAATAATCTTTATAGCTAACGATAATGTGATCTAGACAGATAATGCCT
AAATCTTCACATGATCGTTT

Product: putative glutamine amidotransferase, class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MTKPIIGITANQRLNMALDNLPWSYAPTGFVQAVTQSGGLPLLLPIGDEAAAKTYVSMVDKIILIGGQNVDPKYYQEEKA
AFDDDFSPERDTFELAIIKEAITLKKPILGICRGTQLMNVALGGNLNQHIDSHWQEAPSDFLSHEMIIEPDSILYPIYGH
KTLINSFHRQSLKTVAKDLKVIARDPRDGTIEAVISTNDAIPFLGVQWHPELLQGVRDEDLQLFRLFVNDF

Sequences:

>Translated_231_residues
MTKPIIGITANQRLNMALDNLPWSYAPTGFVQAVTQSGGLPLLLPIGDEAAAKTYVSMVDKIILIGGQNVDPKYYQEEKA
AFDDDFSPERDTFELAIIKEAITLKKPILGICRGTQLMNVALGGNLNQHIDSHWQEAPSDFLSHEMIIEPDSILYPIYGH
KTLINSFHRQSLKTVAKDLKVIARDPRDGTIEAVISTNDAIPFLGVQWHPELLQGVRDEDLQLFRLFVNDF
>Mature_230_residues
TKPIIGITANQRLNMALDNLPWSYAPTGFVQAVTQSGGLPLLLPIGDEAAAKTYVSMVDKIILIGGQNVDPKYYQEEKAA
FDDDFSPERDTFELAIIKEAITLKKPILGICRGTQLMNVALGGNLNQHIDSHWQEAPSDFLSHEMIIEPDSILYPIYGHK
TLINSFHRQSLKTVAKDLKVIARDPRDGTIEAVISTNDAIPFLGVQWHPELLQGVRDEDLQLFRLFVNDF

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=234, Percent_Identity=34.1880341880342, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 25800; Mature: 25669

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPIIGITANQRLNMALDNLPWSYAPTGFVQAVTQSGGLPLLLPIGDEAAAKTYVSMVD
CCCCEEEEECCCEEHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH
KIILIGGQNVDPKYYQEEKAAFDDDFSPERDTFELAIIKEAITLKKPILGICRGTQLMNV
HEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEE
ALGGNLNQHIDSHWQEAPSDFLSHEMIIEPDSILYPIYGHKTLINSFHRQSLKTVAKDLK
EECCCCHHHHHHHHHHCHHHHHCCCEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
VIARDPRDGTIEAVISTNDAIPFLGVQWHPELLQGVRDEDLQLFRLFVNDF
HHHCCCCCCEEEEEEECCCCCCEECCEECHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKPIIGITANQRLNMALDNLPWSYAPTGFVQAVTQSGGLPLLLPIGDEAAAKTYVSMVD
CCCEEEEECCCEEHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH
KIILIGGQNVDPKYYQEEKAAFDDDFSPERDTFELAIIKEAITLKKPILGICRGTQLMNV
HEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEEE
ALGGNLNQHIDSHWQEAPSDFLSHEMIIEPDSILYPIYGHKTLINSFHRQSLKTVAKDLK
EECCCCHHHHHHHHHHCHHHHHCCCEEECCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
VIARDPRDGTIEAVISTNDAIPFLGVQWHPELLQGVRDEDLQLFRLFVNDF
HHHCCCCCCEEEEEEECCCCCCEECCEECHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]