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The map label for this gene is agaC [H]

Identifier: 21910279

GI number: 21910279

Start: 796085

End: 796765

Strand: Direct

Name: agaC [H]

Synonym: SpyM3_0743

Alternate gene names: 21910279

Gene position: 796085-796765 (Clockwise)

Preceding gene: 21910278

Following gene: 21910280

Centisome position: 41.89

GC content: 41.41

Gene sequence:

>681_bases
ATGAAGGTCGGTATCTTAATGGGGGCCTCTCTAGAAGCTCTTTTCCTAGGAAATGTGAATATTGGGGGTGTTATTGCAGC
TGAGCCTGTAACAGCGACTGCCATGGCAACAACCTTTACCATTATTTCACATATTGACCAAAAAGCAGCCATGACCCTAG
CTGTTCCAATTGGAATGTTGGCAGCCTTTGTGGTTATGTTTTTGAAAAACGTCTTCATGAATATCTTTGCTCCAATGGTT
GATAAAGCTGCAGCAGCTAACCATCAAGGTAAACTAGTGATGCTCCACTATGGCACTTGGATTATCTATTACTTAATCAT
TGCCTCTATTTCTTTCATTGGTATTTTAGTAGGTAGTGGACCTGTTAATGCCTTTGTGGAACACATTCCTCAAAATCTCA
TGAATGGCTTGAGTGCTGCGGGAGGCCTTCTTCCAGCTGTCGGTTTTGCCATGCTGATGAAATTATTGTGGACCAACAAA
TTAGCTGTTTTTTACCTATTGGGCTTTGTCTTAACAGCTTATTTGAAATTACCAGCGGTTGCAGTTGCTGCCCTAGGAGC
AGTTATTTGCGTCATTAGTTCCCAACGTGATCTAGAATTAGACGCAATTACTAGAGGTGCAATTAGTAAACAAACAACCT
TTGACTCTAAAGAATCAGAAGAGGAGGACTTCTTCGCATGA

Upstream 100 bases:

>100_bases
AGCTGTATTGATTTGTTTTGGGGGAAATTATTTAACCGGTCAAAGCATGATGGAAAGACCCCTAGTAGTTGGACTGGTCA
CAGGTCTTCTTTTAGGAGAT

Downstream 100 bases:

>100_bases
CATCACAAGATAATTTGACTAAAGAAGACCGTAAAATGCTTCGCTCAGTCTTTTGGCGCTCATGGACGATGAATGCTAGT
CGTACTGGGGCAACACAATA

Product: PTS system mannose/fructose family transporter subunit IIC

Products: NA

Alternate protein names: EIIC-Aga; PTS system N-acetylgalactosamine-specific EIIC component 1 [H]

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMV
DKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNK
LAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA

Sequences:

>Translated_226_residues
MKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMV
DKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNK
LAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA
>Mature_226_residues
MKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGMLAAFVVMFLKNVFMNIFAPMV
DKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSGPVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNK
LAVFYLLGFVLTAYLKLPAVAVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3715

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIC type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI1789528, Length=225, Percent_Identity=28, Blast_Score=91, Evalue=7e-20,
Organism=Escherichia coli, GI1788121, Length=196, Percent_Identity=29.0816326530612, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004700
- InterPro:   IPR018404 [H]

Pfam domain/function: PF03609 EII-Sor [H]

EC number: NA

Molecular weight: Translated: 24003; Mature: 24003

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51106 PTS_EIIC_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGML
CCEEEEECCCEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
PVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKVGILMGASLEALFLGNVNIGGVIAAEPVTATAMATTFTIISHIDQKAAMTLAVPIGML
CCEEEEECCCEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAFVVMFLKNVFMNIFAPMVDKAAAANHQGKLVMLHYGTWIIYYLIIASISFIGILVGSG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
PVNAFVEHIPQNLMNGLSAAGGLLPAVGFAMLMKLLWTNKLAVFYLLGFVLTAYLKLPAV
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVAALGAVICVISSQRDLELDAITRGAISKQTTFDSKESEEEDFFA
HHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]