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The map label for this gene is csrA [H]

Identifier: 21910275

GI number: 21910275

Start: 793203

End: 793640

Strand: Direct

Name: csrA [H]

Synonym: SpyM3_0739

Alternate gene names: 21910275

Gene position: 793203-793640 (Clockwise)

Preceding gene: 21910274

Following gene: 21910276

Centisome position: 41.74

GC content: 42.24

Gene sequence:

>438_bases
ATGGAAACATCAGATGAGTTAAAACAACGCATTGGTGAGCTTTCTTACGAGGTCACCCAGCATGCAGCAACAGAATCTCC
CTTTACAGGAGAATATGATGATTTTTTTGAGAAGGGTATCTATGTCGATATCGTCAGTGGTGAGGTCTTGTTTTCATCAC
TGGATAAATTTAATTCTGGCTGTGGTTGGCCTGCCTTTTCAAAACCTATTGAAAATCGTATGGTCACAAACCACGATGAC
TCTTCTTATGGGATGAGACGAGTTGAGGTTAAAAGCCGTGAAGCAGGATCGCATTTGGGGCATGTCTTTAGTGACGGCCC
CAAAGAAGCTGGAGGCTTACGTTACTGTATCAATTCAGCAGCTCTTAAATTCATTCCTTATGACCAGATGGAAAAAGAAG
GCTATGCCCAATGGCTCACATTGTTTGATGAGACATAA

Upstream 100 bases:

>100_bases
TAGGTATAACGTCTTGCCTGAGGTGCTGTGAACAAATCAGTTACCGCTCACCTCTTTTTTTGGTAAAATGTAAGCACTAA
AACATCAAAAGGAGTTTTCC

Downstream 100 bases:

>100_bases
CAGGGTTTCAAAATGACTAAAAAAGAAGCGTCAGTGATTCCTACAAGCACTGGATTGGTGAGGCGTACGGGTCAATTTTA
CAAGCCTTTGTAAAAGGTCT

Product: methionine sulfoxide reductase B

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
METSDELKQRIGELSYEVTQHAATESPFTGEYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDD
SSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDET

Sequences:

>Translated_145_residues
METSDELKQRIGELSYEVTQHAATESPFTGEYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDD
SSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDET
>Mature_145_residues
METSDELKQRIGELSYEVTQHAATESPFTGEYDDFFEKGIYVDIVSGEVLFSSLDKFNSGCGWPAFSKPIENRMVTNHDD
SSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSAALKFIPYDQMEKEGYAQWLTLFDET

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=126, Percent_Identity=50.7936507936508, Blast_Score=129, Evalue=9e-31,
Organism=Homo sapiens, GI301336162, Length=126, Percent_Identity=50.7936507936508, Blast_Score=129, Evalue=9e-31,
Organism=Homo sapiens, GI73089054, Length=126, Percent_Identity=50.7936507936508, Blast_Score=129, Evalue=9e-31,
Organism=Homo sapiens, GI37620216, Length=123, Percent_Identity=52.0325203252033, Blast_Score=129, Evalue=1e-30,
Organism=Homo sapiens, GI117606353, Length=129, Percent_Identity=38.7596899224806, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1788077, Length=122, Percent_Identity=41.8032786885246, Blast_Score=112, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17553450, Length=124, Percent_Identity=45.9677419354839, Blast_Score=116, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI115532676, Length=124, Percent_Identity=45.9677419354839, Blast_Score=116, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6319816, Length=119, Percent_Identity=38.655462184874, Blast_Score=78, Evalue=5e-16,
Organism=Drosophila melanogaster, GI45553335, Length=125, Percent_Identity=48.8, Blast_Score=125, Evalue=8e-30,
Organism=Drosophila melanogaster, GI21356369, Length=125, Percent_Identity=48.8, Blast_Score=125, Evalue=8e-30,
Organism=Drosophila melanogaster, GI24645799, Length=125, Percent_Identity=48.8, Blast_Score=125, Evalue=1e-29,
Organism=Drosophila melanogaster, GI221378664, Length=122, Percent_Identity=48.3606557377049, Blast_Score=122, Evalue=5e-29,
Organism=Drosophila melanogaster, GI221378662, Length=129, Percent_Identity=45.7364341085271, Blast_Score=120, Evalue=3e-28,
Organism=Drosophila melanogaster, GI24645804, Length=136, Percent_Identity=44.1176470588235, Blast_Score=118, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24645801, Length=136, Percent_Identity=44.1176470588235, Blast_Score=117, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 16369; Mature: 16369

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSDELKQRIGELSYEVTQHAATESPFTGEYDDFFEKGIYVDIVSGEVLFSSLDKFNSG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHCCC
CGWPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSA
CCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHH
ALKFIPYDQMEKEGYAQWLTLFDET
HHEECCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METSDELKQRIGELSYEVTQHAATESPFTGEYDDFFEKGIYVDIVSGEVLFSSLDKFNSG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECHHHHHHHHHHHCCC
CGWPAFSKPIENRMVTNHDDSSYGMRRVEVKSREAGSHLGHVFSDGPKEAGGLRYCINSA
CCCCCCCCCHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHHH
ALKFIPYDQMEKEGYAQWLTLFDET
HHEECCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]