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The map label for this gene is cpsY [C]

Identifier: 21910150

GI number: 21910150

Start: 673994

End: 674779

Strand: Reverse

Name: cpsY [C]

Synonym: SpyM3_0614

Alternate gene names: 21910150

Gene position: 674779-673994 (Counterclockwise)

Preceding gene: 21910159

Following gene: 21910143

Centisome position: 35.5

GC content: 40.2

Gene sequence:

>786_bases
ATGGAGATGGGCATTACCATTTTCAACCGAAATCCTAAAGGGATCACCTTGACAAAAGATGGGGTGGAATTTTTATCTTA
TGCTCGCCAAATTATAGAGCAAACATCACTGTTAGAAGACCGCTATAAAAACCACAATACTGGCCGAGAGCTCTTTAGCG
TTTCATCTCAACATTATGCCTTCGTAGTCAATGCATTTGTCTCACTCCTCAAGCGGACCGACATGACTCGGTATGAACTC
TTTTTGCGCGAGACAAGAACTTGGGAAATCATTGATGATGTCAAAAACTTTCGATCTGAAATTGGTGTTCTCTTTATCAA
CGACTATAACCGAGATGTCTTGACCAAATTATTTGATGACAATCATTTGACTGCCTCTCCATTATTTAAGGCACAGCCTC
ATATTTTTGTCAGCAAATCAAATCCTCTAGCAACTAAAAGCCTATTAAGCATGGACGACTTGAGAGATTTTCCTTACCTG
AGCTATGACCAAGGGATTCACAACTCCTTTTATTTTTCAGAAGAGATGATGTCCCAGATGCCCCACAACAAATCAATTGT
GGTCAGTGACCGTGCCACCCTCTTTAACTTAATGATTGGTTTAGATGGCTACACCGTTGCCAGTGGTATTCTAAATAGCA
ATCTAAATGGTGACCAGATTGTGGCTATCCCGCTAGATGTCCCTGACGAAATTGACATTGTTTTTATCAAGCATGAAAAA
GCCAACTTGTCCAAAATGGGGGAACGTTTTATCGAATACCTTCTCGAAGAAGTAACCTTTGATTAA

Upstream 100 bases:

>100_bases
TTATATTATCAAAATTGTTGAGTGCGGCTCTATGAATGAAGCTGCTAAGCAATTATTTATCACACAACCAAGTCTATCCA
ATGCGGTCAAGGATTTGGAA

Downstream 100 bases:

>100_bases
TGTCTTTTTCAATCGTCATACTAAAAAAACACGGTAGTAAGACCTGTATCGGTCAAGTTATCGTGTTTTTTGATAAATAT
CAGACAATAGATTGTCTCCA

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; LysR Family Regulatory Protein; Transcriptional Regulator CpsY; LysR-Type Transcriptional Regulator; Regulatory Protein; Transcription Regulator; Transcriptional Regulator MarR Family; HTH-Type Transcriptional Regulator CmhR; MarR Family Transcriptional Regulator; HTH-Type Transcriptional Regulator AbgR; HTH-Type Transcriptional Regulator FhuR; LysR Family Regulator; Hydrogen Peroxide-Inducible Genes Activator; LysR Family Transcription Regulator; Fhu Operon Transcription Regulator

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MEMGITIFNRNPKGITLTKDGVEFLSYARQIIEQTSLLEDRYKNHNTGRELFSVSSQHYAFVVNAFVSLLKRTDMTRYEL
FLRETRTWEIIDDVKNFRSEIGVLFINDYNRDVLTKLFDDNHLTASPLFKAQPHIFVSKSNPLATKSLLSMDDLRDFPYL
SYDQGIHNSFYFSEEMMSQMPHNKSIVVSDRATLFNLMIGLDGYTVASGILNSNLNGDQIVAIPLDVPDEIDIVFIKHEK
ANLSKMGERFIEYLLEEVTFD

Sequences:

>Translated_261_residues
MEMGITIFNRNPKGITLTKDGVEFLSYARQIIEQTSLLEDRYKNHNTGRELFSVSSQHYAFVVNAFVSLLKRTDMTRYEL
FLRETRTWEIIDDVKNFRSEIGVLFINDYNRDVLTKLFDDNHLTASPLFKAQPHIFVSKSNPLATKSLLSMDDLRDFPYL
SYDQGIHNSFYFSEEMMSQMPHNKSIVVSDRATLFNLMIGLDGYTVASGILNSNLNGDQIVAIPLDVPDEIDIVFIKHEK
ANLSKMGERFIEYLLEEVTFD
>Mature_261_residues
MEMGITIFNRNPKGITLTKDGVEFLSYARQIIEQTSLLEDRYKNHNTGRELFSVSSQHYAFVVNAFVSLLKRTDMTRYEL
FLRETRTWEIIDDVKNFRSEIGVLFINDYNRDVLTKLFDDNHLTASPLFKAQPHIFVSKSNPLATKSLLSMDDLRDFPYL
SYDQGIHNSFYFSEEMMSQMPHNKSIVVSDRATLFNLMIGLDGYTVASGILNSNLNGDQIVAIPLDVPDEIDIVFIKHEK
ANLSKMGERFIEYLLEEVTFD

Specific function: May Be An Accessory Regulatory Protein Within The Cys Regulon. [C]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30135; Mature: 30135

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMGITIFNRNPKGITLTKDGVEFLSYARQIIEQTSLLEDRYKNHNTGRELFSVSSQHYA
CCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHH
FVVNAFVSLLKRTDMTRYELFLRETRTWEIIDDVKNFRSEIGVLFINDYNRDVLTKLFDD
HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCC
NHLTASPLFKAQPHIFVSKSNPLATKSLLSMDDLRDFPYLSYDQGIHNSFYFSEEMMSQM
CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHC
PHNKSIVVSDRATLFNLMIGLDGYTVASGILNSNLNGDQIVAIPLDVPDEIDIVFIKHEK
CCCCEEEEECHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCC
ANLSKMGERFIEYLLEEVTFD
CCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEMGITIFNRNPKGITLTKDGVEFLSYARQIIEQTSLLEDRYKNHNTGRELFSVSSQHYA
CCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHH
FVVNAFVSLLKRTDMTRYELFLRETRTWEIIDDVKNFRSEIGVLFINDYNRDVLTKLFDD
HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHCC
NHLTASPLFKAQPHIFVSKSNPLATKSLLSMDDLRDFPYLSYDQGIHNSFYFSEEMMSQM
CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHC
PHNKSIVVSDRATLFNLMIGLDGYTVASGILNSNLNGDQIVAIPLDVPDEIDIVFIKHEK
CCCCEEEEECHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCC
ANLSKMGERFIEYLLEEVTFD
CCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA