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The map label for this gene is agaV [H]

Identifier: 21909981

GI number: 21909981

Start: 489669

End: 490157

Strand: Reverse

Name: agaV [H]

Synonym: SpyM3_0445

Alternate gene names: 21909981

Gene position: 490157-489669 (Counterclockwise)

Preceding gene: 21909982

Following gene: 21909980

Centisome position: 25.79

GC content: 40.9

Gene sequence:

>489_bases
ATGACACAACCAAACATTATCATGACGCGAGTTGATGAGCGCTTGATTCACGGACAGGGGCAATTATGGGTCAAATTTCT
CAACTGCAACACTGTTATCGTCGCTAACGATGCCGTTTCTGAAGATAAGATTCAACAATCCCTCATGAAAACAGTTATCC
CATCCAGTATTGCCATTCGTTTTTTCTCCATTCAAAAAGTGATTGACATCATTCATAAAGCAAGTCCTGCTCAAAGTATC
TTCATCGTGGTCAAAGATTTGCAAGATGCCAAACGCCTAGTTGAAGGGGGTGTTCCCATCACAGAAATCAATATCGGTAA
TATTCATAAAACTGATGATAAGGTTGCGATTACCCAGTTTATTTCGCTGGGAGAAACAGACAAGTCTGCTATTCGTTGCT
TAGCCCATGACCACCAAGTGGTTTTTAACACCAAAACAACTCCAGCTGGCAATAGCGCCTCTGACGTTGACATCTTAGAT
TATATTTAA

Upstream 100 bases:

>100_bases
GGGGAGACTATTACTACCTTGAAGCTCTGCTTCGTTTCTACAAAGACTGGAACCCTTACTGGTAACAAACACCGATACCT
ACATTTAAAAAGGAGATTTT

Downstream 100 bases:

>100_bases
TGAATAAAGGAGATTGATATGGATATCAATTTGTTACAGGCACTTTTAATTGGTCTTTGGACAGCCTTTTGTTTCAGCGG
AATGTTACTTGGCATCTACA

Product: PTS system N-acetylgalactosamine-specific transporter subunit IIB

Products: NA

Alternate protein names: EIIB-Aga'; PTS system N-acetylgalactosamine-specific EIIB component 2 [H]

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MTQPNIIMTRVDERLIHGQGQLWVKFLNCNTVIVANDAVSEDKIQQSLMKTVIPSSIAIRFFSIQKVIDIIHKASPAQSI
FIVVKDLQDAKRLVEGGVPITEINIGNIHKTDDKVAITQFISLGETDKSAIRCLAHDHQVVFNTKTTPAGNSASDVDILD
YI

Sequences:

>Translated_162_residues
MTQPNIIMTRVDERLIHGQGQLWVKFLNCNTVIVANDAVSEDKIQQSLMKTVIPSSIAIRFFSIQKVIDIIHKASPAQSI
FIVVKDLQDAKRLVEGGVPITEINIGNIHKTDDKVAITQFISLGETDKSAIRCLAHDHQVVFNTKTTPAGNSASDVDILD
YI
>Mature_161_residues
TQPNIIMTRVDERLIHGQGQLWVKFLNCNTVIVANDAVSEDKIQQSLMKTVIPSSIAIRFFSIQKVIDIIHKASPAQSIF
IVVKDLQDAKRLVEGGVPITEINIGNIHKTDDKVAITQFISLGETDKSAIRCLAHDHQVVFNTKTTPAGNSASDVDILDY
I

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This

COG id: COG3444

COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIB type-4 domain [H]

Homologues:

Organism=Escherichia coli, GI87082217, Length=132, Percent_Identity=48.4848484848485, Blast_Score=129, Evalue=7e-32,
Organism=Escherichia coli, GI1789527, Length=144, Percent_Identity=38.8888888888889, Blast_Score=101, Evalue=2e-23,
Organism=Escherichia coli, GI1788120, Length=131, Percent_Identity=31.2977099236641, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004720
- InterPro:   IPR018455 [H]

Pfam domain/function: PF03830 PTSIIB_sorb [H]

EC number: =2.7.1.69 [H]

Molecular weight: Translated: 17908; Mature: 17777

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS51101 PTS_EIIB_TYPE_4

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPNIIMTRVDERLIHGQGQLWVKFLNCNTVIVANDAVSEDKIQQSLMKTVIPSSIAIR
CCCCCEEEEEHHHHHHCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHH
FFSIQKVIDIIHKASPAQSIFIVVKDLQDAKRLVEGGVPITEINIGNIHKTDDKVAITQF
HHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH
ISLGETDKSAIRCLAHDHQVVFNTKTTPAGNSASDVDILDYI
HHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TQPNIIMTRVDERLIHGQGQLWVKFLNCNTVIVANDAVSEDKIQQSLMKTVIPSSIAIR
CCCCEEEEEHHHHHHCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHH
FFSIQKVIDIIHKASPAQSIFIVVKDLQDAKRLVEGGVPITEINIGNIHKTDDKVAITQF
HHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHH
ISLGETDKSAIRCLAHDHQVVFNTKTTPAGNSASDVDILDYI
HHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]