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The map label for this gene is yfdH [C]

Identifier: 21909894

GI number: 21909894

Start: 397078

End: 398064

Strand: Reverse

Name: yfdH [C]

Synonym: SpyM3_0358

Alternate gene names: 21909894

Gene position: 398064-397078 (Counterclockwise)

Preceding gene: 21909895

Following gene: 21909893

Centisome position: 20.94

GC content: 37.28

Gene sequence:

>987_bases
TTGAAATATCTCAGCTTTTGTGTTACAATTGCCCTAAAATTCCATTTGAAAGAAAAGTCTATGACACTACTATCTATCAT
TGTCCCCTGCTTTAATGAAGAAGCAAACATTCTTCCTTATTTTGAAGAAATGCATCAACTAGAAACGTCCATGACCAACC
AACTTGCTTTTGAATACATTTTTATTGATGATGGTTCTAAGGATAACACCTTAGGTATTTTGCGTGAGCTAGCTGCTCGC
TTTCCAAATGTGCATTATCTGTCTTTTTCACGCCATTTTGGCAAGGAAGCTGGACTCTTAGCTGGACTAAAAGAAGCCAA
AGGCAATTACATTACTGTGATGGATGTGGATCTGCAAGATCCACCCGAACTTTTGCCAATTATGTACGCTAAGCTAAAAG
AGGGTTATGACATCGTTGGCACCAGACGCCAAAATAGACAAGGAGAACCACTAATGCGTTCAATGTGTTCGAATCTATTT
TATGGACTGATCAAACACTTATCAGATACTGAAATGGTCAATGGAGTTCGGGATTATCGGTTAATGACCAGACAAGTCGT
TGATAGCATTCTTGAGTTGGGAGAGGTTAATCGTTTTTCAAAAGGGATCTTTTCGTGGGTTGGTTATCGTATCACCTATC
TTAGTTTTGAAAACCAAAAACGCAAATATGGAAAAAGTCGTTGGCATTTTTGGGAGTTGCTCCGATATTCTTTAGATGGC
TTTATCAACTTTTCAGAAATGCCGTTAACCATTGCTACCTGGACAGGGACTTTCAGCTTTTTGATTTCTATTTTCGCCAT
CTTATTTATCATTATCAGAAAGATACTCTTTGGTGATCCTGTCTCTGGTTGGGCCAGCACTGTCTCTATTATTTTATTCA
TGGGAGGCATTCAGCTCTTTTGCATGGGTATTATTGGAAAATATATTTCAAAAATATTCCTTGAAACTAAAAAAAGGCCT
CTCTATATTATCAAAGAAAAACATTAA

Upstream 100 bases:

>100_bases
TGATTTAAACAACTAATACTATTAACAACAGAAGCTTTAAAGCTTCTGTTGTTTTATTTTTTAACCTGACGATTGGGACA
ATCTCATTATTAACAGAGTT

Downstream 100 bases:

>100_bases
ATTAAAACATTTTTCTCATCAATCGTTTCCTACTCCTTCTGTGCGCGAAGCTTTCTTTTTAAGCCCGTTATACCAAATGA
TAATGACCTTTCCAAAATAG

Product: putative sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKYLSFCVTIALKFHLKEKSMTLLSIIVPCFNEEANILPYFEEMHQLETSMTNQLAFEYIFIDDGSKDNTLGILRELAAR
FPNVHYLSFSRHFGKEAGLLAGLKEAKGNYITVMDVDLQDPPELLPIMYAKLKEGYDIVGTRRQNRQGEPLMRSMCSNLF
YGLIKHLSDTEMVNGVRDYRLMTRQVVDSILELGEVNRFSKGIFSWVGYRITYLSFENQKRKYGKSRWHFWELLRYSLDG
FINFSEMPLTIATWTGTFSFLISIFAILFIIIRKILFGDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRP
LYIIKEKH

Sequences:

>Translated_328_residues
MKYLSFCVTIALKFHLKEKSMTLLSIIVPCFNEEANILPYFEEMHQLETSMTNQLAFEYIFIDDGSKDNTLGILRELAAR
FPNVHYLSFSRHFGKEAGLLAGLKEAKGNYITVMDVDLQDPPELLPIMYAKLKEGYDIVGTRRQNRQGEPLMRSMCSNLF
YGLIKHLSDTEMVNGVRDYRLMTRQVVDSILELGEVNRFSKGIFSWVGYRITYLSFENQKRKYGKSRWHFWELLRYSLDG
FINFSEMPLTIATWTGTFSFLISIFAILFIIIRKILFGDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRP
LYIIKEKH
>Mature_328_residues
MKYLSFCVTIALKFHLKEKSMTLLSIIVPCFNEEANILPYFEEMHQLETSMTNQLAFEYIFIDDGSKDNTLGILRELAAR
FPNVHYLSFSRHFGKEAGLLAGLKEAKGNYITVMDVDLQDPPELLPIMYAKLKEGYDIVGTRRQNRQGEPLMRSMCSNLF
YGLIKHLSDTEMVNGVRDYRLMTRQVVDSILELGEVNRFSKGIFSWVGYRITYLSFENQKRKYGKSRWHFWELLRYSLDG
FINFSEMPLTIATWTGTFSFLISIFAILFIIIRKILFGDPVSGWASTVSIILFMGGIQLFCMGIIGKYISKIFLETKKRP
LYIIKEKH

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=302, Percent_Identity=38.7417218543046, Blast_Score=221, Evalue=3e-59,
Organism=Escherichia coli, GI1788588, Length=312, Percent_Identity=29.4871794871795, Blast_Score=147, Evalue=7e-37,
Organism=Saccharomyces cerevisiae, GI6325441, Length=120, Percent_Identity=35.8333333333333, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 38035; Mature: 38035

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLSFCVTIALKFHLKEKSMTLLSIIVPCFNEEANILPYFEEMHQLETSMTNQLAFEYI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEE
FIDDGSKDNTLGILRELAARFPNVHYLSFSRHFGKEAGLLAGLKEAKGNYITVMDVDLQD
EEECCCCCCHHHHHHHHHHHCCCEEEEECHHHCCCHHHHHHHHHHCCCCEEEEEEECCCC
PPELLPIMYAKLKEGYDIVGTRRQNRQGEPLMRSMCSNLFYGLIKHLSDTEMVNGVRDYR
CHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LMTRQVVDSILELGEVNRFSKGIFSWVGYRITYLSFENQKRKYGKSRWHFWELLRYSLDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHCCHHHHHHHHHHHHHHC
FINFSEMPLTIATWTGTFSFLISIFAILFIIIRKILFGDPVSGWASTVSIILFMGGIQLF
CEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
CMGIIGKYISKIFLETKKRPLYIIKEKH
HHHHHHHHHHHHHHHCCCCCEEEEECCC
>Mature Secondary Structure
MKYLSFCVTIALKFHLKEKSMTLLSIIVPCFNEEANILPYFEEMHQLETSMTNQLAFEYI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEEEEE
FIDDGSKDNTLGILRELAARFPNVHYLSFSRHFGKEAGLLAGLKEAKGNYITVMDVDLQD
EEECCCCCCHHHHHHHHHHHCCCEEEEECHHHCCCHHHHHHHHHHCCCCEEEEEEECCCC
PPELLPIMYAKLKEGYDIVGTRRQNRQGEPLMRSMCSNLFYGLIKHLSDTEMVNGVRDYR
CHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LMTRQVVDSILELGEVNRFSKGIFSWVGYRITYLSFENQKRKYGKSRWHFWELLRYSLDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHCCHHHHHHHHHHHHHHC
FINFSEMPLTIATWTGTFSFLISIFAILFIIIRKILFGDPVSGWASTVSIILFMGGIQLF
CEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
CMGIIGKYISKIFLETKKRPLYIIKEKH
HHHHHHHHHHHHHHHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]