| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
Click here to switch to the map view.
The map label for this gene is yhjG [H]
Identifier: 218930982
GI number: 218930982
Start: 4491308
End: 4493530
Strand: Reverse
Name: yhjG [H]
Synonym: YPO3987
Alternate gene names: 218930982
Gene position: 4493530-4491308 (Counterclockwise)
Preceding gene: 218930983
Following gene: 218930979
Centisome position: 96.56
GC content: 52.86
Gene sequence:
>2223_bases ATGACAAGAACCGGAAAAGTATTGGTGGGCGCCAGTGGGTTTATCCTGTTGTCATTGGTGGCGGTGGTGATATTTGTCTC TTCTTTTGACTGGAATCGCTTGAAGCCAACGATTAACCAAAAAGTCTCCGCCGAGTTACAACGGCCTTTTGCCATTCGTG GCAATTTGAGTGTGGATTGGTCACGAGAAGGCGAAGGCCCTGGCTGGCGCGGTTGGATCCCCTGGCCGCATATCCATGCG GAAGATTTGGTCTTGGGTAACCCAACGACGTTAATCAGCACACAAGAGAGCCGTGACGCTCAATCAGCACAAGGCACGCC GCTCTCCGACGCGTTTCCCACCGGAGAGATGGTGACGCTTAAGCGAATCGACGCCAGCCTTGCTCCGCTGTCACTATTGA GCAAAGAAGTTCGTATCCCCCGCCTTTGGCTGACGCAGCCAGATATTCATTTGCAACGCCTGGCGAATGGCAATAACAAC TGGACGTTTAATCTGACCAATACCTCCACGGATAGCGCGTCTTGGTCAGTGGATATCGGCGATATTATTTTTGATCGCGG TGAGATAACGCTGAAAGATGCCATCCTACAAGCTGATTTACTCGCGGTGATTGATCCGCTGGCTAAAGCGTTGCCGTTCG CACAAGTGACCGGTGTCCGTCGCGGGGCCAGTATTAATTCGGTGACCAGTACTCATTCGGTGAACACGACTACACCAGTG AACACGACGACAGCCACGGCCACGACTAACCCTGTGACAGAGACGGTAAAAAGCACGACCCCAGATTACCTCTTCGGCTG GAAAGTAGACGGTCAGTATCAGGGGCAGCCCTTAGCGGGCAGTGGGAAAATAGGGGGCATGATATCGATGAATGACGCGA ATGTACCGTTCCCTCTGCAAGCGGATATGCGCTACGGTTCTACTCTGGTGGCCGTCGTCGGGACCTTAACCGATCCCGGA AATCTGGCGGGGCTGGATCTACAATTGGTCTTATCCGGGACCAGTCTGGATAACCTCTATCCATTGCTCGATGTCGTACT GCCCGCCACCCCGCCTTATCAGACCGAGGGTCATCTGAGTGCTCGCCTAAAACAAGCAGGGGGCGCGGTTTATCATTATG AAAATTTTAATGGGAAGATTGGTGACAGTGATATTCACGGTGACCTGACGTATACCGACAGTCAGCCCCGGCCGAAATTA GCCGGTCAGGTCGATTCGGAAAAATTACGTTTTACCGATTTGGCTCCGCTGATCGGGGCCGACTCCAATCAGGAAAAAGC CCTACGAGGTGAACGGAATCGGCAGCCGGGCAATAAGGTCCTGCCGACAGAAACGTTTGATACCAAAAGTTGGGGAGTGA TGGACGCGGATGTCACTTATACGGCTAAGCGTATCGAACGGGATAAGTCATTACCGCTAAGTGATCTGTACACCCATGTC GTCTTAAAAGAGGGGATGTTACTGCTCGACCCGCTGCGGTTTGGGATGGCGGGAGGGGATCTGGCTGCAACTTTGCGCCT CGATAGTCACCAAATCCCGATGAATGGCAAGGTTGATTTGCATGTCCGGCGCATACAATTAAAAGCCTTGCTGCCACAGG TACAGGCGATGCGGAGCAGCCTGGGGCGCTTGAGTGGTGATGCCTCCTTTATCGCAGCAGGCAACTCGGTTGCTGGCCTG TTAGCAACCAGCAACGGTAACGTGCGCCTGCTACTGAGCCAGGGGCAGATCAGCCGTAGCCTGATGGAGTTACTCGGCCT GAATGTGGGTAACTATCTGGTGGCGAAGCTGTTTGGTGATGATACGGTGAAAATTAACTGTGCGGTGGCAGATATTACGT TGCGTAATGGGGTGGCGACGCCGAACGTGTTTGTCTTCGATACTGAAAATGCCATTATCAATATTACCGGTAATGCTAAT TTTGCTACCGAGCGGCTGAATTTATCCATCGATCCTGAAAGCAAAGGGCTACGTATTCTGACCCTGCGCTCGCCACTGTA TGTCAAAGGGACCTTTAAACGGCCTGATGTGGGGGTGAAAACCGGAGCGTTGATTGCCCGAGGTGCCGTTGCGGCAGCAC TGGGGGTGGCATTAACGCCGGCAGCGGCATTACTGGCACTGATCTCCCCAGTGAAGGTGAAGGTGAAGAGAATCAGTGCG CCCCGTTACTGCGAAAAATACAGCAAAAGAAATAATGTGTTATTGCACCGGGAGGTGAGGTAG
Upstream 100 bases:
>100_bases CTGTTTGAACAGGTATTAATCGAGGATAGAGACCCAACACGCTACCCTTAGAGAGAATGCGTAGATTCACAGCGACTGTA CGTAGAAGCATGGAGCTATT
Downstream 100 bases:
>100_bases CACCTGACAGGTGTGATCTTGCAGCTCCTCTGCTGAGGCGCGATCCTGGGTTATCAGGCTTGCTTTGTTGGCCAGCAGTA AAAAATCCCCAGAGGGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 740; Mature: 739
Protein sequence:
>740_residues MTRTGKVLVGASGFILLSLVAVVIFVSSFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGEGPGWRGWIPWPHIHA EDLVLGNPTTLISTQESRDAQSAQGTPLSDAFPTGEMVTLKRIDASLAPLSLLSKEVRIPRLWLTQPDIHLQRLANGNNN WTFNLTNTSTDSASWSVDIGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSVNTTTPV NTTTATATTNPVTETVKSTTPDYLFGWKVDGQYQGQPLAGSGKIGGMISMNDANVPFPLQADMRYGSTLVAVVGTLTDPG NLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTYTDSQPRPKL AGQVDSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKVLPTETFDTKSWGVMDADVTYTAKRIERDKSLPLSDLYTHV VLKEGMLLLDPLRFGMAGGDLAATLRLDSHQIPMNGKVDLHVRRIQLKALLPQVQAMRSSLGRLSGDASFIAAGNSVAGL LATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGDDTVKINCAVADITLRNGVATPNVFVFDTENAIINITGNAN FATERLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISPVKVKVKRISA PRYCEKYSKRNNVLLHREVR
Sequences:
>Translated_740_residues MTRTGKVLVGASGFILLSLVAVVIFVSSFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGEGPGWRGWIPWPHIHA EDLVLGNPTTLISTQESRDAQSAQGTPLSDAFPTGEMVTLKRIDASLAPLSLLSKEVRIPRLWLTQPDIHLQRLANGNNN WTFNLTNTSTDSASWSVDIGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSVNTTTPV NTTTATATTNPVTETVKSTTPDYLFGWKVDGQYQGQPLAGSGKIGGMISMNDANVPFPLQADMRYGSTLVAVVGTLTDPG NLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTYTDSQPRPKL AGQVDSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKVLPTETFDTKSWGVMDADVTYTAKRIERDKSLPLSDLYTHV VLKEGMLLLDPLRFGMAGGDLAATLRLDSHQIPMNGKVDLHVRRIQLKALLPQVQAMRSSLGRLSGDASFIAAGNSVAGL LATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGDDTVKINCAVADITLRNGVATPNVFVFDTENAIINITGNAN FATERLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISPVKVKVKRISA PRYCEKYSKRNNVLLHREVR >Mature_739_residues TRTGKVLVGASGFILLSLVAVVIFVSSFDWNRLKPTINQKVSAELQRPFAIRGNLSVDWSREGEGPGWRGWIPWPHIHAE DLVLGNPTTLISTQESRDAQSAQGTPLSDAFPTGEMVTLKRIDASLAPLSLLSKEVRIPRLWLTQPDIHLQRLANGNNNW TFNLTNTSTDSASWSVDIGDIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSVNTTTPVN TTTATATTNPVTETVKSTTPDYLFGWKVDGQYQGQPLAGSGKIGGMISMNDANVPFPLQADMRYGSTLVAVVGTLTDPGN LAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLSARLKQAGGAVYHYENFNGKIGDSDIHGDLTYTDSQPRPKLA GQVDSEKLRFTDLAPLIGADSNQEKALRGERNRQPGNKVLPTETFDTKSWGVMDADVTYTAKRIERDKSLPLSDLYTHVV LKEGMLLLDPLRFGMAGGDLAATLRLDSHQIPMNGKVDLHVRRIQLKALLPQVQAMRSSLGRLSGDASFIAAGNSVAGLL ATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGDDTVKINCAVADITLRNGVATPNVFVFDTENAIINITGNANF ATERLNLSIDPESKGLRILTLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISPVKVKVKRISAP RYCEKYSKRNNVLLHREVR
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=722, Percent_Identity=50.415512465374, Blast_Score=716, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 79838; Mature: 79707
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTGKVLVGASGFILLSLVAVVIFVSSFDWNRLKPTINQKVSAELQRPFAIRGNLSVDW CCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEE SREGEGPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSAQGTPLSDAFPTGEMVTL CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE KRIDASLAPLSLLSKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSASWSVDIG EECCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCEEEEEECCCCCCCEEEEEHH DIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSVNTTTPV HEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC NTTTATATTNPVTETVKSTTPDYLFGWKVDGQYQGQPLAGSGKIGGMISMNDANVPFPLQ CCEEEECCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEE ADMRYGSTLVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLS CCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHH ARLKQAGGAVYHYENFNGKIGDSDIHGDLTYTDSQPRPKLAGQVDSEKLRFTDLAPLIGA HHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCHHHCC DSNQEKALRGERNRQPGNKVLPTETFDTKSWGVMDADVTYTAKRIERDKSLPLSDLYTHV CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCHHHHHHHH VLKEGMLLLDPLRFGMAGGDLAATLRLDSHQIPMNGKVDLHVRRIQLKALLPQVQAMRSS HHHCCCEEEEHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHH LGRLSGDASFIAAGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGD HHCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEEECC DTVKINCAVADITLRNGVATPNVFVFDTENAIINITGNANFATERLNLSIDPESKGLRIL CEEEEEEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEECCCCCCEEEE TLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISPVKVKVKRISA EECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC PRYCEKYSKRNNVLLHREVR CHHHHHHHCCCCEEEEEECC >Mature Secondary Structure TRTGKVLVGASGFILLSLVAVVIFVSSFDWNRLKPTINQKVSAELQRPFAIRGNLSVDW CCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCEEEEE SREGEGPGWRGWIPWPHIHAEDLVLGNPTTLISTQESRDAQSAQGTPLSDAFPTGEMVTL CCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEE KRIDASLAPLSLLSKEVRIPRLWLTQPDIHLQRLANGNNNWTFNLTNTSTDSASWSVDIG EECCCCCCHHHHHHHHCCCCEEEECCCCHHHHHHCCCCCCEEEEEECCCCCCCEEEEEHH DIIFDRGEITLKDAILQADLLAVIDPLAKALPFAQVTGVRRGASINSVTSTHSVNTTTPV HEEECCCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC NTTTATATTNPVTETVKSTTPDYLFGWKVDGQYQGQPLAGSGKIGGMISMNDANVPFPLQ CCEEEECCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEE ADMRYGSTLVAVVGTLTDPGNLAGLDLQLVLSGTSLDNLYPLLDVVLPATPPYQTEGHLS CCCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHH ARLKQAGGAVYHYENFNGKIGDSDIHGDLTYTDSQPRPKLAGQVDSEKLRFTDLAPLIGA HHHHHCCCEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCHHHCC DSNQEKALRGERNRQPGNKVLPTETFDTKSWGVMDADVTYTAKRIERDKSLPLSDLYTHV CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCHHHHHHHH VLKEGMLLLDPLRFGMAGGDLAATLRLDSHQIPMNGKVDLHVRRIQLKALLPQVQAMRSS HHHCCCEEEEHHHHCCCCCCEEEEEEECCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHH LGRLSGDASFIAAGNSVAGLLATSNGNVRLLLSQGQISRSLMELLGLNVGNYLVAKLFGD HHCCCCCCEEEECCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHCCCCCCEEEEEEECC DTVKINCAVADITLRNGVATPNVFVFDTENAIINITGNANFATERLNLSIDPESKGLRIL CEEEEEEEEEEEEEECCCCCCEEEEEECCCEEEEEECCCCEEEEEEEEEECCCCCCEEEE TLRSPLYVKGTFKRPDVGVKTGALIARGAVAAALGVALTPAAALLALISPVKVKVKRISA EECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC PRYCEKYSKRNNVLLHREVR CHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]