| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930978
Identifier: 218930978
GI number: 218930978
Start: 4484601
End: 4485470
Strand: Reverse
Name: 218930978
Synonym: YPO3983
Alternate gene names: NA
Gene position: 4485470-4484601 (Counterclockwise)
Preceding gene: 218930979
Following gene: 218930977
Centisome position: 96.38
GC content: 35.52
Gene sequence:
>870_bases ATGACGGAAACAAACATGACGGAAAAAAAGGCACCACCCAAAACGCTACCCTTACAGTTTCCATTGTGCATATTTAAAAC ACGCAATCGTATGGATGATTACGGTGCTGCGGATATGAAGAACGGTGATTTGACTGAAGCTGAATTAAAGGGAAAATTTA ATCTGAGAGGGGTATCCGTTACGCTGGATCCTTACACGGGGGAAAAAACACCCACCAGTTTTGCTATGGATCATTTCAAT AAAAAACCGAAAGAAAAAGTCAATAAAGCAGAAGTCGCCAGAATTTTATTTGATGAGTTTCGTCACTTATCCGATACGTT TTCATTTTCGGGAAAATATCAGAGTATTATGCGTAAGATGATCACGTATATGCAGATAAATAATGGTGCTCCTTTCCGTG ATTTATTACTGGATAGTGCATTAAAAGAGCAGATATTAAGTGATAAATCTAATGATAGTTCATTGCTTAAAATAAAAAAT GCTTTGATAGAAAATATTGATTGGAATAATGGTCATTATCCTATCAATAACAAAGGAATGATGACTGAAGCAATAAAAGA TACAGTTTTACCTAGATTTAACCGATTAAATGATAGGATAAATGGGCTAGGTATTAGTGTTCATGCCATCCATGCAACTC ATATTACTATTAGGTCATTACAAGTCAATGGTAATGAATTTCGTGCAATTGTACACTATCGTTCACAAGATCACTTTGGC CTTGACAATACTGATATGCTGGACTCATTTTATCGCCAATTTCGTATATTCCATATTTGGTTTGTTCTCCAGCGTTGGAG AGGATTAGGCTATAAACCTTTCCTGACTAATATGGAAGCCAGTATAGAAATCACAGGAAAACGAAAATAA
Upstream 100 bases:
>100_bases AGTCAGTTTCTGATAATGATTTGGGGCGGCATCTTGTTACTGGATGCCGCTTTGCGTTATGACGGATAAATTTTTTTATT AAACGGATTTAGTTAGCATT
Downstream 100 bases:
>100_bases AATGTTAAAAACAAAATACAATATCTTATTCGGGGTGGTTACCATTGGAATACTTTATTCTGCATGGGAGATTGCTCGGC CAGTAGAGATTGTTGATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTETNMTEKKAPPKTLPLQFPLCIFKTRNRMDDYGAADMKNGDLTEAELKGKFNLRGVSVTLDPYTGEKTPTSFAMDHFN KKPKEKVNKAEVARILFDEFRHLSDTFSFSGKYQSIMRKMITYMQINNGAPFRDLLLDSALKEQILSDKSNDSSLLKIKN ALIENIDWNNGHYPINNKGMMTEAIKDTVLPRFNRLNDRINGLGISVHAIHATHITIRSLQVNGNEFRAIVHYRSQDHFG LDNTDMLDSFYRQFRIFHIWFVLQRWRGLGYKPFLTNMEASIEITGKRK
Sequences:
>Translated_289_residues MTETNMTEKKAPPKTLPLQFPLCIFKTRNRMDDYGAADMKNGDLTEAELKGKFNLRGVSVTLDPYTGEKTPTSFAMDHFN KKPKEKVNKAEVARILFDEFRHLSDTFSFSGKYQSIMRKMITYMQINNGAPFRDLLLDSALKEQILSDKSNDSSLLKIKN ALIENIDWNNGHYPINNKGMMTEAIKDTVLPRFNRLNDRINGLGISVHAIHATHITIRSLQVNGNEFRAIVHYRSQDHFG LDNTDMLDSFYRQFRIFHIWFVLQRWRGLGYKPFLTNMEASIEITGKRK >Mature_288_residues TETNMTEKKAPPKTLPLQFPLCIFKTRNRMDDYGAADMKNGDLTEAELKGKFNLRGVSVTLDPYTGEKTPTSFAMDHFNK KPKEKVNKAEVARILFDEFRHLSDTFSFSGKYQSIMRKMITYMQINNGAPFRDLLLDSALKEQILSDKSNDSSLLKIKNA LIENIDWNNGHYPINNKGMMTEAIKDTVLPRFNRLNDRINGLGISVHAIHATHITIRSLQVNGNEFRAIVHYRSQDHFGL DNTDMLDSFYRQFRIFHIWFVLQRWRGLGYKPFLTNMEASIEITGKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33433; Mature: 33302
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETNMTEKKAPPKTLPLQFPLCIFKTRNRMDDYGAADMKNGDLTEAELKGKFNLRGVSV CCCCCCCCCCCCCCCCCCCCCHHEEHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEE TLDPYTGEKTPTSFAMDHFNKKPKEKVNKAEVARILFDEFRHLSDTFSFSGKYQSIMRKM EECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ITYMQINNGAPFRDLLLDSALKEQILSDKSNDSSLLKIKNALIENIDWNNGHYPINNKGM HHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCC MTEAIKDTVLPRFNRLNDRINGLGISVHAIHATHITIRSLQVNGNEFRAIVHYRSQDHFG HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEEECCCEEEEEEEECCCCCCC LDNTDMLDSFYRQFRIFHIWFVLQRWRGLGYKPFLTNMEASIEITGKRK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEEECCCC >Mature Secondary Structure TETNMTEKKAPPKTLPLQFPLCIFKTRNRMDDYGAADMKNGDLTEAELKGKFNLRGVSV CCCCCCCCCCCCCCCCCCCCHHEEHHHCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEE TLDPYTGEKTPTSFAMDHFNKKPKEKVNKAEVARILFDEFRHLSDTFSFSGKYQSIMRKM EECCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ITYMQINNGAPFRDLLLDSALKEQILSDKSNDSSLLKIKNALIENIDWNNGHYPINNKGM HHHEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCC MTEAIKDTVLPRFNRLNDRINGLGISVHAIHATHITIRSLQVNGNEFRAIVHYRSQDHFG HHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEEECCCEEEEEEEECCCCCCC LDNTDMLDSFYRQFRIFHIWFVLQRWRGLGYKPFLTNMEASIEITGKRK CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA