Definition Yersinia pestis CO92 chromosome, complete genome.
Accession NC_003143
Length 4,653,728

Click here to switch to the map view.

The map label for this gene is 218930943

Identifier: 218930943

GI number: 218930943

Start: 4446053

End: 4446427

Strand: Reverse

Name: 218930943

Synonym: YPO3947

Alternate gene names: NA

Gene position: 4446427-4446053 (Counterclockwise)

Preceding gene: 218930944

Following gene: 218930942

Centisome position: 95.55

GC content: 41.87

Gene sequence:

>375_bases
TTGAAGCATTCCACGGTAAACCATACTATATTCTTACCGCTTACCCCATGTTTTAGAGACGGTACAATGAAAATAATGGG
TAATTTTTCGGCACTAGAGCACCTGATACAAATTTATTTTGGACAGGATTATTATGAAATCACAGGGGCTACAACAATCG
CGGGTGTTATGGCTTTTTATCTTCAAGACAACTCGCCTTCGCAGATTGAAACGCTGATTTCAGACATAGCTGAATTTACA
GCCGCGTATCCCAATACACTTGATGATGAGCTTAACACGCGTTGGGGTGATGATTTTTCGCCAGAACTGTGGGGAACGAC
ACCTCAAGATTTTTTGCATGATGTGCAGAATCTTGCCTTACAGCATCAAGGCTGA

Upstream 100 bases:

>100_bases
TTTGTTATTAATCACTTTGTTGGCCATGTTATTGGATGTGGGGTAAGGCGCGGGGAACTGGCCGGAACCAAATTGACAAA
ATTTAGGATAGTCATTCGGT

Downstream 100 bases:

>100_bases
CGCTGAATGAAAGCCATCCATCTTGGAACTCTGGTTCGTGTTTTTTTTGGACAAGATTATGATTTATTTGGCGAAGGTAT
AGATGAGATACTTGCCTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKHSTVNHTIFLPLTPCFRDGTMKIMGNFSALEHLIQIYFGQDYYEITGATTIAGVMAFYLQDNSPSQIETLISDIAEFT
AAYPNTLDDELNTRWGDDFSPELWGTTPQDFLHDVQNLALQHQG

Sequences:

>Translated_124_residues
MKHSTVNHTIFLPLTPCFRDGTMKIMGNFSALEHLIQIYFGQDYYEITGATTIAGVMAFYLQDNSPSQIETLISDIAEFT
AAYPNTLDDELNTRWGDDFSPELWGTTPQDFLHDVQNLALQHQG
>Mature_124_residues
MKHSTVNHTIFLPLTPCFRDGTMKIMGNFSALEHLIQIYFGQDYYEITGATTIAGVMAFYLQDNSPSQIETLISDIAEFT
AAYPNTLDDELNTRWGDDFSPELWGTTPQDFLHDVQNLALQHQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14020; Mature: 14020

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHSTVNHTIFLPLTPCFRDGTMKIMGNFSALEHLIQIYFGQDYYEITGATTIAGVMAFY
CCCCCCCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHH
LQDNSPSQIETLISDIAEFTAAYPNTLDDELNTRWGDDFSPELWGTTPQDFLHDVQNLAL
HCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
QHQG
CCCC
>Mature Secondary Structure
MKHSTVNHTIFLPLTPCFRDGTMKIMGNFSALEHLIQIYFGQDYYEITGATTIAGVMAFY
CCCCCCCCEEEEECCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHH
LQDNSPSQIETLISDIAEFTAAYPNTLDDELNTRWGDDFSPELWGTTPQDFLHDVQNLAL
HCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
QHQG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA