| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930932
Identifier: 218930932
GI number: 218930932
Start: 4420487
End: 4420861
Strand: Reverse
Name: 218930932
Synonym: YPO3936
Alternate gene names: NA
Gene position: 4420861-4420487 (Counterclockwise)
Preceding gene: 218930934
Following gene: 218930931
Centisome position: 95.0
GC content: 32.53
Gene sequence:
>375_bases ATGATAAGCTTATCTGAATCAATATATGAGAGATCTGCAGGTAATATGAATACGGCAGTCAGTACAGGTCGTATTAATAT GGTTCATATATTTTCATTTTCTACTTACATCATCTGTACAGTATTTTCATTGCTCCTATTTTATTATTTGGTCAGCCACC TATTACACTCTAAGCATTTTATCTTAAATGTTGTCTCATCCTTTCTGCTTTTAGGGTGTGCTAAGTATCATTTCAACGTT GCAAAGACGGGGGCTTTAGCTATTTTTAATATAACAATAGACAGCAGTGGGGTTTTTATTGCGGTATTAATTCCTTTTAT TTTTTCATCGTCATATTCCGTCCCGTTTTATATGGCTTATAAAAGATACTATTAA
Upstream 100 bases:
>100_bases ATGTTTATCTTATATAAAAGTTGAGTAAAAAATAGGGATATTATCATGGATGTATTAGAAGAGTATCTGGAACGAAACCC TGAATCTAGAGGGTATATAG
Downstream 100 bases:
>100_bases AATTATGGTGAATTCGGTAAGATAGGCCTGATAATTGACCCGGAAGACGTTGATGATCAGTTCGGTTGTTAAAGCTTAAC ACCATAGCATTTGGCGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MISLSESIYERSAGNMNTAVSTGRINMVHIFSFSTYIICTVFSLLLFYYLVSHLLHSKHFILNVVSSFLLLGCAKYHFNV AKTGALAIFNITIDSSGVFIAVLIPFIFSSSYSVPFYMAYKRYY
Sequences:
>Translated_124_residues MISLSESIYERSAGNMNTAVSTGRINMVHIFSFSTYIICTVFSLLLFYYLVSHLLHSKHFILNVVSSFLLLGCAKYHFNV AKTGALAIFNITIDSSGVFIAVLIPFIFSSSYSVPFYMAYKRYY >Mature_124_residues MISLSESIYERSAGNMNTAVSTGRINMVHIFSFSTYIICTVFSLLLFYYLVSHLLHSKHFILNVVSSFLLLGCAKYHFNV AKTGALAIFNITIDSSGVFIAVLIPFIFSSSYSVPFYMAYKRYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14028; Mature: 14028
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLSESIYERSAGNMNTAVSTGRINMVHIFSFSTYIICTVFSLLLFYYLVSHLLHSKHF CCCCHHHHHHHCCCCCCCEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHH ILNVVSSFLLLGCAKYHFNVAKTGALAIFNITIDSSGVFIAVLIPFIFSSSYSVPFYMAY HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEE KRYY EECC >Mature Secondary Structure MISLSESIYERSAGNMNTAVSTGRINMVHIFSFSTYIICTVFSLLLFYYLVSHLLHSKHF CCCCHHHHHHHCCCCCCCEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCHHH ILNVVSSFLLLGCAKYHFNVAKTGALAIFNITIDSSGVFIAVLIPFIFSSSYSVPFYMAY HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEE KRYY EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA