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The map label for this gene is 218930843

Identifier: 218930843

GI number: 218930843

Start: 4309249

End: 4309935

Strand: Direct

Name: 218930843

Synonym: YPO3840

Alternate gene names: NA

Gene position: 4309249-4309935 (Clockwise)

Preceding gene: 218930839

Following gene: 218930850

Centisome position: 92.6

GC content: 49.2

Gene sequence:

>687_bases
GTGAATACTCAGAATAAACAAGAAGGTTTCTCTCCATCGTTAACGACCATTAGAGCCAGAACCCGGCGGTTACTTATTGA
TACCGCCATGTCGATGTATGAACGTGGTGCATTCCCATCAATCACCGAAGTCGCCAGTGCGGCTCAGCTTTCTCGTGCTA
CTGCTTACCGTTACTTTCCGACACAAAGCGCATTGGTTTCAGCCATGGTCGATGAGAGCCTCGGTCCAATATTGGCTTGG
CAACCCACCCAACCGGATGCACGGCAGCGTATCGCCGAATTATTGTCCTTTGCTTATCCGCGCATGTTGCAACATGAAGG
CGTGTTACGTGCAGCGCTGCACTTATCGCTACAGCAATGGGCTGATGCCCGCAACAGTGACAGTAATAACAACAGCAATG
ACAGTAATAACAGCAGCAATGAAGAAAAGTTAATCCGTGGGAACCGTAAACGATTACTGAAATTGGCCGTCGAGCCACTG
GAAGAGACGTTGGCACCAGAGGCCTTGCAACGGGTGATCCATGCCTTTTCATTAATCTATGGCTCTGAAGTTTTTATGGT
GCTGAAAGATATTTGGCATCTGGACGAAGCGGGGATTCAGGATGTAACCCAGTGGATGGGCAAGGCCATTTTGTTGCAAG
CTGAAACCGATTCCCAACTGGCGGCTCAGGACAAAACTCATTCGTGA

Upstream 100 bases:

>100_bases
AGCAGATATAATCAGTATACGAATGTGGCATGTAAACTCATTAACTCTATAAATTCATTAGATCATCAAACTCATTAAGT
CTATAAACCATGGAGCAACC

Downstream 100 bases:

>100_bases
AAATAATGAAAACAGTAAGAACAATGAAAATAGTAAGGAGCAATAAAGATAGTAAGGAGAAATAAAAATAGATAGGTGGC
CGCACTGACACTGCAACCAC

Product: putative TetR family regulatory protein

Products: NA

Alternate protein names: TetR Family Regulatory Protein; Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Tetr-Family Regulatory Protein; Transcriptional Regulator TetR-Family

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNTQNKQEGFSPSLTTIRARTRRLLIDTAMSMYERGAFPSITEVASAAQLSRATAYRYFPTQSALVSAMVDESLGPILAW
QPTQPDARQRIAELLSFAYPRMLQHEGVLRAALHLSLQQWADARNSDSNNNSNDSNNSSNEEKLIRGNRKRLLKLAVEPL
EETLAPEALQRVIHAFSLIYGSEVFMVLKDIWHLDEAGIQDVTQWMGKAILLQAETDSQLAAQDKTHS

Sequences:

>Translated_228_residues
MNTQNKQEGFSPSLTTIRARTRRLLIDTAMSMYERGAFPSITEVASAAQLSRATAYRYFPTQSALVSAMVDESLGPILAW
QPTQPDARQRIAELLSFAYPRMLQHEGVLRAALHLSLQQWADARNSDSNNNSNDSNNSSNEEKLIRGNRKRLLKLAVEPL
EETLAPEALQRVIHAFSLIYGSEVFMVLKDIWHLDEAGIQDVTQWMGKAILLQAETDSQLAAQDKTHS
>Mature_228_residues
MNTQNKQEGFSPSLTTIRARTRRLLIDTAMSMYERGAFPSITEVASAAQLSRATAYRYFPTQSALVSAMVDESLGPILAW
QPTQPDARQRIAELLSFAYPRMLQHEGVLRAALHLSLQQWADARNSDSNNNSNDSNNSSNEEKLIRGNRKRLLKLAVEPL
EETLAPEALQRVIHAFSLIYGSEVFMVLKDIWHLDEAGIQDVTQWMGKAILLQAETDSQLAAQDKTHS

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25555; Mature: 25555

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQNKQEGFSPSLTTIRARTRRLLIDTAMSMYERGAFPSITEVASAAQLSRATAYRYFP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
TQSALVSAMVDESLGPILAWQPTQPDARQRIAELLSFAYPRMLQHEGVLRAALHLSLQQW
CHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADARNSDSNNNSNDSNNSSNEEKLIRGNRKRLLKLAVEPLEETLAPEALQRVIHAFSLIY
HHHCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
GSEVFMVLKDIWHLDEAGIQDVTQWMGKAILLQAETDSQLAAQDKTHS
HHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECCCCCHHHHCCCCCC
>Mature Secondary Structure
MNTQNKQEGFSPSLTTIRARTRRLLIDTAMSMYERGAFPSITEVASAAQLSRATAYRYFP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
TQSALVSAMVDESLGPILAWQPTQPDARQRIAELLSFAYPRMLQHEGVLRAALHLSLQQW
CHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADARNSDSNNNSNDSNNSSNEEKLIRGNRKRLLKLAVEPLEETLAPEALQRVIHAFSLIY
HHHCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
GSEVFMVLKDIWHLDEAGIQDVTQWMGKAILLQAETDSQLAAQDKTHS
HHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEEECCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA