Click here to switch to the map view.

The map label for this gene is ugpA [H]

Identifier: 218930797

GI number: 218930797

Start: 4260268

End: 4261155

Strand: Reverse

Name: ugpA [H]

Synonym: YPO3795

Alternate gene names: 218930797

Gene position: 4261155-4260268 (Counterclockwise)

Preceding gene: 218930798

Following gene: 218930796

Centisome position: 91.56

GC content: 50.23

Gene sequence:

>888_bases
ATGTCACCTTCTCGTCCCGGTTTTTCCTGTAGTTGGTTACCTTATCTGTTGGTATTACCTCAATTGGCGATCACCGCCAT
CTTCTTCTTGTGGCCCGCGGGTGAAGCGCTGTGGTATTCAGTGCAAACGCTGGATCCATTTGGTCTCTCCAGTGAATTTG
TCGGGCTGAGTAATTTTATTCAGCTATTTCAGGATGAGTACTATCTGGCTTCGTTTTATACCACGCTAATTTTTAGCGCG
TTGGTTGCGGGGATCGGCCTGATCGTTTCGCTGTTTTTGGCCGCAATGGTGAATTACGTTCTACGTGGCAGCCGTCTTTA
CCAAACTTTATTGATCCTCCCTTATGCGGTCGCCCCGGCGGTTGCGGCCGTGCTCTGGATCTTCTTGTTTGACCCTGGAT
TGGGTCTGATAACCCATGCTCTGGCTAAGTTGGGTTATAGCTGGAACCATGCGCAAAACAGCGGCCAGGCGATGTTTTTG
GTGGTGTTAGCCTCGGTATGGAAGCAAATCAGCTACAACTTTTTATTCTTTCTGGCCGCGCTGCAATCTATACCAAAATC
ACTGGTTGAGGCTGCCGCTATTGACGGTGCCGGGCCGGTACGCCGTTTCTTCAATTTGGTATTGCCGTTGATTTCACCCG
TCAGCTTCTTCCTGCTGGTGGTGAATCTGGTTTATGCCTTCTTTGATACTTTCCCGGTGATTGACGCCGCTACTGGCGGT
GGCCCAGTACAAGCTACCACCACGCTGATTTATAAAATTTACCGCGAAGGTTTCGCCGGGTTGGATTTATCCAGCTCCGC
TGCCCAGTCGGTGATCCTGATGTTACTGGTGATTGGCCTGACGGTTATCCAGTTCCGCTTTGTTGAGCGTAAGGTGCGTT
ACCAATGA

Upstream 100 bases:

>100_bases
GTGACGAAAAATAGTTTGTGCGCTATTGAGTTAAGAAGTCACTTTTTTTGATTACCACCTTGGTGGTAATCAGCACGGCG
TCTGATAAACGGTTAATTTT

Downstream 100 bases:

>100_bases
TCGAGAATCGTCGTGGATTGGATATCTTTTGTCACATCATGCTGATTATCGGGGTGCTATTGATCCTGTTCCCACTGTAT
GTGGCGTTCGTTGCGGCTTC

Product: glycerol-3-phosphate transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MSPSRPGFSCSWLPYLLVLPQLAITAIFFLWPAGEALWYSVQTLDPFGLSSEFVGLSNFIQLFQDEYYLASFYTTLIFSA
LVAGIGLIVSLFLAAMVNYVLRGSRLYQTLLILPYAVAPAVAAVLWIFLFDPGLGLITHALAKLGYSWNHAQNSGQAMFL
VVLASVWKQISYNFLFFLAALQSIPKSLVEAAAIDGAGPVRRFFNLVLPLISPVSFFLLVVNLVYAFFDTFPVIDAATGG
GPVQATTTLIYKIYREGFAGLDLSSSAAQSVILMLLVIGLTVIQFRFVERKVRYQ

Sequences:

>Translated_295_residues
MSPSRPGFSCSWLPYLLVLPQLAITAIFFLWPAGEALWYSVQTLDPFGLSSEFVGLSNFIQLFQDEYYLASFYTTLIFSA
LVAGIGLIVSLFLAAMVNYVLRGSRLYQTLLILPYAVAPAVAAVLWIFLFDPGLGLITHALAKLGYSWNHAQNSGQAMFL
VVLASVWKQISYNFLFFLAALQSIPKSLVEAAAIDGAGPVRRFFNLVLPLISPVSFFLLVVNLVYAFFDTFPVIDAATGG
GPVQATTTLIYKIYREGFAGLDLSSSAAQSVILMLLVIGLTVIQFRFVERKVRYQ
>Mature_294_residues
SPSRPGFSCSWLPYLLVLPQLAITAIFFLWPAGEALWYSVQTLDPFGLSSEFVGLSNFIQLFQDEYYLASFYTTLIFSAL
VAGIGLIVSLFLAAMVNYVLRGSRLYQTLLILPYAVAPAVAAVLWIFLFDPGLGLITHALAKLGYSWNHAQNSGQAMFLV
VLASVWKQISYNFLFFLAALQSIPKSLVEAAAIDGAGPVRRFFNLVLPLISPVSFFLLVVNLVYAFFDTFPVIDAATGGG
PVQATTTLIYKIYREGFAGLDLSSSAAQSVILMLLVIGLTVIQFRFVERKVRYQ

Specific function: Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=295, Percent_Identity=79.3220338983051, Blast_Score=461, Evalue=1e-131,
Organism=Escherichia coli, GI1790465, Length=259, Percent_Identity=31.6602316602317, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787570, Length=251, Percent_Identity=30.6772908366534, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32504; Mature: 32372

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPSRPGFSCSWLPYLLVLPQLAITAIFFLWPAGEALWYSVQTLDPFGLSSEFVGLSNFI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEHHHCCCCCCCHHHHHHHHHH
QLFQDEYYLASFYTTLIFSALVAGIGLIVSLFLAAMVNYVLRGSRLYQTLLILPYAVAPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VAAVLWIFLFDPGLGLITHALAKLGYSWNHAQNSGQAMFLVVLASVWKQISYNFLFFLAA
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQSIPKSLVEAAAIDGAGPVRRFFNLVLPLISPVSFFLLVVNLVYAFFDTFPVIDAATGG
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GPVQATTTLIYKIYREGFAGLDLSSSAAQSVILMLLVIGLTVIQFRFVERKVRYQ
CCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA