| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is murB
Identifier: 218930765
GI number: 218930765
Start: 4216624
End: 4217661
Strand: Reverse
Name: murB
Synonym: YPO3760
Alternate gene names: 218930765
Gene position: 4217661-4216624 (Counterclockwise)
Preceding gene: 218930766
Following gene: 218930764
Centisome position: 90.63
GC content: 43.55
Gene sequence:
>1038_bases ATGTCGAATCAGCGTTCCTCTCTAAAACACCTTAATACCTTTGCGCTACCTGCTTATGCAAGCAATGTCATTAGTGCTGG CTCAGTAGAAACATTAATTGCGGCTTGGCATGAATCAAAAGCCAAGCGACAGCCGGTACTATTACTAGGTGAAGGTAGCA ATGTGTTATTTATTAAAAATTTCTCTGGGACAGTATTACTCAATAGGATTATGGGGATTACTTCTACCGAAGACAGTGCT GCTTGGTATTTACATGTCGGTGCTGGGGAAAATTGGCATCAACTGGTATGTCATTCACTGCAAAATAATATGCCGGGGTT GGAAAATTTAGCGTTAATTCCAGGCTGTGTCGGCTCTGCGCCGATCCAAAATATAGGTGCCTATGGCGTTGAATTAAAAC AAGTATGTGAATATGTTGATTTACTTGATATGGATAAAGGTACTATTCAGCGTATCTCCGCTGAGGAGTGTCAGTTTGGT TACCGTGACAGCATTTTTAAACATCGCTATGGGAATGGATTTGCTATCGTATCTGTCGGTATTAAATTGATGAAATCATG GACTCCAACGCTGGGTTATGGCGACTTAATACATATGGACCCATTAACAGTTACTGCCACAGATATTTTTAACTCTGTCT GTACAATGCGGCGGAGTAAACTTCCAGACCCAATGGTCACTGGCAATGCCGGGAGTTTCTTCAAAAACCCTGTAGTAAGC GCAGCAATCGCTGAGGAGATCGTACATTGTTACCCCAATGCTCCTCATTATCTGCAGCCAGATGGGTCAGTAAAACTTGC AGCAGGTTGGTTGATCGATCAGTGTTCACTTAAGGGGTACCAGATTGGTGGTGCCGCAGTACACCAGCAACAAGCTCTGG TGCTGATTAACCAGTCAGAAGCGACTGGCCAAGATGTAATACATCTTGCACGTTATATCCGCCAGCAGGTCGCACAGAGA TTTTCAATCTGGCTAGAACCAGAGGTACGCTTTATTGCTGATAATGGTGAAGTTAATGCTGTGGAGCATTTATCGTGA
Upstream 100 bases:
>100_bases TCACTACTTTTTCATTATTTACTTGAAATAAAAAATACAAACAGCCCATTACGATCGGTTAGACTAGCGCGAGAGTTATT TAGAATGAGCATCTAATGTA
Downstream 100 bases:
>100_bases AAGATATCAGGGTCCCCTTACGGTTAGTCAGTATATTATCTGATGGTTTTTTTCACTCCGGTGAGCAATTGGGTGAAACG TTAGGCATGAGTCGCGCTGC
Product: UDP-N-acetylenolpyruvoylglucosamine reductase
Products: NA
Alternate protein names: UDP-N-acetylmuramate dehydrogenase
Number of amino acids: Translated: 345; Mature: 344
Protein sequence:
>345_residues MSNQRSSLKHLNTFALPAYASNVISAGSVETLIAAWHESKAKRQPVLLLGEGSNVLFIKNFSGTVLLNRIMGITSTEDSA AWYLHVGAGENWHQLVCHSLQNNMPGLENLALIPGCVGSAPIQNIGAYGVELKQVCEYVDLLDMDKGTIQRISAEECQFG YRDSIFKHRYGNGFAIVSVGIKLMKSWTPTLGYGDLIHMDPLTVTATDIFNSVCTMRRSKLPDPMVTGNAGSFFKNPVVS AAIAEEIVHCYPNAPHYLQPDGSVKLAAGWLIDQCSLKGYQIGGAAVHQQQALVLINQSEATGQDVIHLARYIRQQVAQR FSIWLEPEVRFIADNGEVNAVEHLS
Sequences:
>Translated_345_residues MSNQRSSLKHLNTFALPAYASNVISAGSVETLIAAWHESKAKRQPVLLLGEGSNVLFIKNFSGTVLLNRIMGITSTEDSA AWYLHVGAGENWHQLVCHSLQNNMPGLENLALIPGCVGSAPIQNIGAYGVELKQVCEYVDLLDMDKGTIQRISAEECQFG YRDSIFKHRYGNGFAIVSVGIKLMKSWTPTLGYGDLIHMDPLTVTATDIFNSVCTMRRSKLPDPMVTGNAGSFFKNPVVS AAIAEEIVHCYPNAPHYLQPDGSVKLAAGWLIDQCSLKGYQIGGAAVHQQQALVLINQSEATGQDVIHLARYIRQQVAQR FSIWLEPEVRFIADNGEVNAVEHLS >Mature_344_residues SNQRSSLKHLNTFALPAYASNVISAGSVETLIAAWHESKAKRQPVLLLGEGSNVLFIKNFSGTVLLNRIMGITSTEDSAA WYLHVGAGENWHQLVCHSLQNNMPGLENLALIPGCVGSAPIQNIGAYGVELKQVCEYVDLLDMDKGTIQRISAEECQFGY RDSIFKHRYGNGFAIVSVGIKLMKSWTPTLGYGDLIHMDPLTVTATDIFNSVCTMRRSKLPDPMVTGNAGSFFKNPVVSA AIAEEIVHCYPNAPHYLQPDGSVKLAAGWLIDQCSLKGYQIGGAAVHQQQALVLINQSEATGQDVIHLARYIRQQVAQRF SIWLEPEVRFIADNGEVNAVEHLS
Specific function: Cell wall formation
COG id: COG0812
COG function: function code M; UDP-N-acetylmuramate dehydrogenase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain
Homologues:
Organism=Escherichia coli, GI1790407, Length=339, Percent_Identity=61.9469026548673, Blast_Score=451, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MURB_YERPE (Q8ZAN4)
Other databases:
- EMBL: AL590842 - EMBL: AE009952 - EMBL: AE017042 - PIR: AH0457 - RefSeq: NP_667808.1 - RefSeq: NP_994578.1 - RefSeq: YP_002348640.1 - ProteinModelPortal: Q8ZAN4 - SMR: Q8ZAN4 - GeneID: 1145417 - GeneID: 1176590 - GeneID: 2764500 - GenomeReviews: AE009952_GR - GenomeReviews: AE017042_GR - GenomeReviews: AL590842_GR - KEGG: ype:YPO3760 - KEGG: ypk:y0471 - KEGG: ypm:YP_3288 - HOGENOM: HBG686573 - OMA: GAAPMQN - ProtClustDB: PRK00046 - BioCyc: YPES187410:Y0471-MONOMER - BioCyc: YPES214092:YPO3760-MONOMER - BRENDA: 1.1.1.158 - GO: GO:0005737 - HAMAP: MF_00037 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR003170 - InterPro: IPR011601 - InterPro: IPR006094 - Gene3D: G3DSA:3.30.465.10 - Gene3D: G3DSA:3.30.43.10 - Gene3D: G3DSA:3.90.78.10 - PANTHER: PTHR21071 - TIGRFAMs: TIGR00179
Pfam domain/function: PF01565 FAD_binding_4; PF02873 MurB_C; SSF56176 FAD-binding_2; SSF56194 MurB_C
EC number: =1.1.1.158
Molecular weight: Translated: 37768; Mature: 37636
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS51387 FAD_PCMH
Important sites: ACT_SITE 162-162 ACT_SITE 232-232 ACT_SITE 328-328
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQRSSLKHLNTFALPAYASNVISAGSVETLIAAWHESKAKRQPVLLLGEGSNVLFIKN CCCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEC FSGTVLLNRIMGITSTEDSAAWYLHVGAGENWHQLVCHSLQNNMPGLENLALIPGCVGSA CCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCC PIQNIGAYGVELKQVCEYVDLLDMDKGTIQRISAEECQFGYRDSIFKHRYGNGFAIVSVG CHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCCHHHHHHHHCCCCEEEHHHH IKLMKSWTPTLGYGDLIHMDPLTVTATDIFNSVCTMRRSKLPDPMVTGNAGSFFKNPVVS HHHHHHCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHCCCCCEEECCCCCHHHCHHHH AAIAEEIVHCYPNAPHYLQPDGSVKLAAGWLIDQCSLKGYQIGGAAVHQQQALVLINQSE HHHHHHHHHHCCCCCCEECCCCCEEEEECEEEECCCCCCEEECCHHHCCCCEEEEEECCC ATGQDVIHLARYIRQQVAQRFSIWLEPEVRFIADNGEVNAVEHLS CCHHHHHHHHHHHHHHHHHHHCEEECCCEEEEECCCCCCCCCCCC >Mature Secondary Structure SNQRSSLKHLNTFALPAYASNVISAGSVETLIAAWHESKAKRQPVLLLGEGSNVLFIKN CCCHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEC FSGTVLLNRIMGITSTEDSAAWYLHVGAGENWHQLVCHSLQNNMPGLENLALIPGCVGSA CCCHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCEEECCCCCCCC PIQNIGAYGVELKQVCEYVDLLDMDKGTIQRISAEECQFGYRDSIFKHRYGNGFAIVSVG CHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHCCHHHHCCCCHHHHHHHHCCCCEEEHHHH IKLMKSWTPTLGYGDLIHMDPLTVTATDIFNSVCTMRRSKLPDPMVTGNAGSFFKNPVVS HHHHHHCCCCCCCCCEEEECCCEEEHHHHHHHHHHHHHHCCCCCEEECCCCCHHHCHHHH AAIAEEIVHCYPNAPHYLQPDGSVKLAAGWLIDQCSLKGYQIGGAAVHQQQALVLINQSE HHHHHHHHHHCCCCCCEECCCCCEEEEECEEEECCCCCCEEECCHHHCCCCEEEEEECCC ATGQDVIHLARYIRQQVAQRFSIWLEPEVRFIADNGEVNAVEHLS CCHHHHHHHHHHHHHHHHHHHCEEECCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430