| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930712
Identifier: 218930712
GI number: 218930712
Start: 4139430
End: 4140911
Strand: Reverse
Name: 218930712
Synonym: YPO3706
Alternate gene names: NA
Gene position: 4140911-4139430 (Counterclockwise)
Preceding gene: 218930713
Following gene: 218930711
Centisome position: 88.98
GC content: 49.6
Gene sequence:
>1482_bases ATGCCTTTACATGAAGAAAATACCGTTTTAGCGGCAGAACCTGCCAGTGCAACATTCTTGCTCGACGAAATCATGTCACA AACCCGTATGGCACCGGGAAACGATGGTTACGATATCGCTAAACAGGGTGTGGCCGCTTTTATTAGCAGTATTCTGGATA CCGGAACCAACGAAGAGCCGATTAACAAGCTGTTAGTTGACCGCATGATCATCGAACTCGACAAAAAGTTGAGTGCTCAG ATGGACGAGATCCTACATGCTAACGAATTCCGTGAAATAGAATCTTCATGGCGCTCATTGAAGCTGTTGGTGGATCGGAC CGATTTCCGTGAAAACATCAAAATCAATATCATGCATGCAACGAAAGAAGAGTTGCTGGAAGATTTTGAGTTCTCGCCAG AAATTATTCAGTCAGGCTTCTACAAACACGTTTATTCCTCAGGGTACGGCCAATTCGGTGGTGAACCCACTGCCGCGATC ATTGGTAACTACGCGTTCAACAATAGCTCACCTGACATGAAGCTCTTGCAATACGTAAGTGCTGTTGGCGCGATGGCACA TGCCCCCTTCTTATCCAGTGTGGCCCCTGATTTCTTTGGCATCAGCAGCTTCACTGAGTTACCCGCGATTAAAGATCTGA AATCTGTATTTGAAGGGCCGGCTCACACCAAATGGCGTGCTCTGCGTGAGTCTGAAGATTCACGTTATCTTGGTTTGACC ACTCCTCGTTTCCTGTTGCGCTTACCTTACTCGACCGTTGAAAACCCCATTAAAAACTTCAACTACTACGAGGATGTCAG CCGGAATCACGAGCATTTCTTGTGGGGCAACACCGCATTCCTGCTAGCGTCCTGCCTGACCGACAGCTTCGCCAAGTACC GTTGGTGCCCGAATATTATTGGGCCGCAAAGTGGCGGCACGGTTCACGATCTCCCGGTTCATCTCTATGAAGCGATGGGG CAGATTCAGGCCAAAATCCCAACCGAAGTTCTGATCACTGACCGTCGTGAGTTTGAACTGGCGGAAGAGGGCTTTATCAC CCTGACCATGCGTAAAGGCAGTGATAACGCCGCATTCTTCTCGGCGAATTCGGTGCAAAAACCAAAAGTCTTCCCGAATA CCCGCGAAGGGAAAATGGCAGAAACCAACTACAAGTTGGGCACGCAACTGCCGTACATGTTTGTCATCAACCGCCTTGCG CACTACATCAAAGTGCTCCAGCGCGAGCAGATTGGTTCATGGAAAGAACGACAGGATCTGGAGCGCGAGCTCAATATCTG GCTCAAGCAGTACATTGCCGATCAAGAAAACCCACCAACGGATGTTCGTAGCCGTCGTCCTCTGCGTTCAGCGCAAATCC AGGTACTGGATGTTGAAGGTGATCCGGGCTGGTACCAGGTTGCGATGCAGGTTCGCCCGCATTTCAAATACATGGGGGCG AGCTTCGAGCTGTCACTGGTTGGCCGTTTGGATAAGGAATAA
Upstream 100 bases:
>100_bases CTGAAAGAATTGGACATTCTTAATCAAAAATAATAGCTCTTCATCAAAAGTAATAGCTCTTCATCAAAAATAATAGCTCG GGTAAGAGGGAATTCTACGT
Downstream 100 bases:
>100_bases CCGACGATGGCCGCGCTTCTTAATTGGGATCGAGGGAGTTCTGCCAGTTTGTTTGACCGCATACAGGGGAAGGGCGCTAG CTCTTCCTCCGATGGCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MPLHEENTVLAAEPASATFLLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSAQ MDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSGFYKHVYSSGYGQFGGEPTAAI IGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFFGISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLT TPRFLLRLPYSTVENPIKNFNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAMG QIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKMAETNYKLGTQLPYMFVINRLA HYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPPTDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGA SFELSLVGRLDKE
Sequences:
>Translated_493_residues MPLHEENTVLAAEPASATFLLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSAQ MDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSGFYKHVYSSGYGQFGGEPTAAI IGNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFFGISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLT TPRFLLRLPYSTVENPIKNFNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAMG QIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKMAETNYKLGTQLPYMFVINRLA HYIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPPTDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGA SFELSLVGRLDKE >Mature_492_residues PLHEENTVLAAEPASATFLLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEPINKLLVDRMIIELDKKLSAQM DEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHATKEELLEDFEFSPEIIQSGFYKHVYSSGYGQFGGEPTAAII GNYAFNNSSPDMKLLQYVSAVGAMAHAPFLSSVAPDFFGISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLTT PRFLLRLPYSTVENPIKNFNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNIIGPQSGGTVHDLPVHLYEAMGQ IQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFFSANSVQKPKVFPNTREGKMAETNYKLGTQLPYMFVINRLAH YIKVLQREQIGSWKERQDLERELNIWLKQYIADQENPPTDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGAS FELSLVGRLDKE
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56133; Mature: 56002
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLHEENTVLAAEPASATFLLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEP CCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH INKLLVDRMIIELDKKLSAQMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC TKEELLEDFEFSPEIIQSGFYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVS CHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCCHHHHHHHHH AVGAMAHAPFLSSVAPDFFGISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLT HHHHHHHHHHHHHHCCCHHCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCCCEECCC TPRFLLRLPYSTVENPIKNFNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNII CHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCC GPQSGGTVHDLPVHLYEAMGQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFF CCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCEEEEEEECCCCCCEEE SANSVQKPKVFPNTREGKMAETNYKLGTQLPYMFVINRLAHYIKVLQREQIGSWKERQDL ECCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ERELNIWLKQYIADQENPPTDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGA HHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEEEEEHHCCCHHHCCC SFELSLVGRLDKE CEEEEEECCCCCC >Mature Secondary Structure PLHEENTVLAAEPASATFLLDEIMSQTRMAPGNDGYDIAKQGVAAFISSILDTGTNEEP CCCCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH INKLLVDRMIIELDKKLSAQMDEILHANEFREIESSWRSLKLLVDRTDFRENIKINIMHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC TKEELLEDFEFSPEIIQSGFYKHVYSSGYGQFGGEPTAAIIGNYAFNNSSPDMKLLQYVS CHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCCHHHHHHHHH AVGAMAHAPFLSSVAPDFFGISSFTELPAIKDLKSVFEGPAHTKWRALRESEDSRYLGLT HHHHHHHHHHHHHHCCCHHCCCHHHHCCHHHHHHHHHCCCCCHHHHHHHCCCCCCEECCC TPRFLLRLPYSTVENPIKNFNYYEDVSRNHEHFLWGNTAFLLASCLTDSFAKYRWCPNII CHHHHHCCCHHHHHHHHHCCCHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCCC GPQSGGTVHDLPVHLYEAMGQIQAKIPTEVLITDRREFELAEEGFITLTMRKGSDNAAFF CCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCEEEEEEECCCCCCEEE SANSVQKPKVFPNTREGKMAETNYKLGTQLPYMFVINRLAHYIKVLQREQIGSWKERQDL ECCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH ERELNIWLKQYIADQENPPTDVRSRRPLRSAQIQVLDVEGDPGWYQVAMQVRPHFKYMGA HHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCEEEEEHHCCCHHHCCC SFELSLVGRLDKE CEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA