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The map label for this gene is cybC2

Identifier: 218930701

GI number: 218930701

Start: 4128086

End: 4128472

Strand: Direct

Name: cybC2

Synonym: YPO3694

Alternate gene names: 218930701

Gene position: 4128086-4128472 (Clockwise)

Preceding gene: 218930700

Following gene: 218930709

Centisome position: 88.7

GC content: 48.32

Gene sequence:

>387_bases
ATGGGTAAAACACTAATGGCATTAATCACCGCCGCGTTACTGAGTACGAGCAGTTTAGTCATGGCGGCCAGCGTTGCTGA
CGATATGGAGACGATTGCCGAGCATTACGGCAAGGTATTGAAGGCCGATTCCACAGCGGTGATTAAACAAGATTTACAGG
CGATGCGAGTGGCCGCAGTGGATGCACAAAAGGGCATTCCCACAAAATTGAAGAGTAAAGTTGAAGACAGTCCTGAAATG
AAGGATTTTCGCCATGGCATGGATGTGCTGATTGGGGAAATTGATGGGGCGCTGGCCTTGGCGGATCAAGGTAAGTTGGA
TGAAGCAAAGCAAGCGGCACAAGATTTTAAAGACACCCGCAATACCTATCACAAAAAGTACCGCTGA

Upstream 100 bases:

>100_bases
TACTAAAATTAACTGTCAGTTTTACCTGCCATTGCCTATGTTAAGGAAGAGCAAAATAAGTCGTAAATACTAACCTAACG
ATAACAATAGGAATGTGAGC

Downstream 100 bases:

>100_bases
GCCTGAGATAGATAAGGGCGCAGATTGGAACGCGGCTTGCCGTGGCGAAGCCCATAGATGGGCCAGGCAATGAGTGCAGC
CAACGCCCTGCATCTTGAAG

Product: putative cytochrome

Products: reduced cytochrome b [C]

Alternate protein names: Cytochrome b-562 2

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MGKTLMALITAALLSTSSLVMAASVADDMETIAEHYGKVLKADSTAVIKQDLQAMRVAAVDAQKGIPTKLKSKVEDSPEM
KDFRHGMDVLIGEIDGALALADQGKLDEAKQAAQDFKDTRNTYHKKYR

Sequences:

>Translated_128_residues
MGKTLMALITAALLSTSSLVMAASVADDMETIAEHYGKVLKADSTAVIKQDLQAMRVAAVDAQKGIPTKLKSKVEDSPEM
KDFRHGMDVLIGEIDGALALADQGKLDEAKQAAQDFKDTRNTYHKKYR
>Mature_127_residues
GKTLMALITAALLSTSSLVMAASVADDMETIAEHYGKVLKADSTAVIKQDLQAMRVAAVDAQKGIPTKLKSKVEDSPEMK
DFRHGMDVLIGEIDGALALADQGKLDEAKQAAQDFKDTRNTYHKKYR

Specific function: Electron-transport protein of unknown function

COG id: COG3783

COG function: function code C; Soluble cytochrome b562

Gene ontology:

Cell location: Periplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b562 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): C5622_YERPE (Q8ZAU2)

Other databases:

- EMBL:   AL590842
- EMBL:   AE009952
- EMBL:   AE017042
- PIR:   AF0449
- RefSeq:   NP_667512.1
- RefSeq:   NP_995119.1
- RefSeq:   YP_002348576.1
- ProteinModelPortal:   Q8ZAU2
- SMR:   Q8ZAU2
- GeneID:   1145116
- GeneID:   1176513
- GeneID:   2766706
- GenomeReviews:   AE009952_GR
- GenomeReviews:   AE017042_GR
- GenomeReviews:   AL590842_GR
- KEGG:   ype:YPO3694
- KEGG:   ypk:y0169
- KEGG:   ypm:YP_3850
- HOGENOM:   HBG416794
- OMA:   DFRHGLD
- ProtClustDB:   CLSK889554
- BioCyc:   YPES187410:Y0169-MONOMER
- BioCyc:   YPES214092:YPO3694-MONOMER
- GO:   GO:0006810
- InterPro:   IPR009155
- InterPro:   IPR010980
- Gene3D:   G3DSA:1.20.120.10
- PIRSF:   PIRSF000029

Pfam domain/function: PF07361 Cytochrom_B562; SSF47175 Cyt_c_b562

EC number: NA

Molecular weight: Translated: 13897; Mature: 13766

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKTLMALITAALLSTSSLVMAASVADDMETIAEHYGKVLKADSTAVIKQDLQAMRVAAV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DAQKGIPTKLKSKVEDSPEMKDFRHGMDVLIGEIDGALALADQGKLDEAKQAAQDFKDTR
HHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHH
NTYHKKYR
HHHHHCCC
>Mature Secondary Structure 
GKTLMALITAALLSTSSLVMAASVADDMETIAEHYGKVLKADSTAVIKQDLQAMRVAAV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
DAQKGIPTKLKSKVEDSPEMKDFRHGMDVLIGEIDGALALADQGKLDEAKQAAQDFKDTR
HHCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHH
NTYHKKYR
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: cytochrome b oxidized; Electron [C]

Specific reaction: cytochrome b oxidized + 2 Electron = reduced cytochrome b [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430