Click here to switch to the map view.

The map label for this gene is yhcO [H]

Identifier: 218930697

GI number: 218930697

Start: 4124523

End: 4124804

Strand: Direct

Name: yhcO [H]

Synonym: YPO3690

Alternate gene names: 218930697

Gene position: 4124523-4124804 (Clockwise)

Preceding gene: 218930696

Following gene: 218930699

Centisome position: 88.63

GC content: 45.39

Gene sequence:

>282_bases
ATGGTAAAGGTGGTATTCGATTTTAACCATATACCGGATCTTCCTGCATTTTACCGCGCATTTTCTCAGAATTTTGCGCT
GAGCGAAGATTTTGGGGCCAATCTGGATGCGTTGTGGGATGTGGTCACCGGAGAAATAGCGTTACCGGTAGAGATTGAAT
TCGTTCATTTCAGCCGCCGCCATCAACGGCGCTTTGCTGCGATTGTATTGCTATTAGAAGAGGCTGAAGAGGAGTTGGCA
GGGCGTTTACATTTTAATGTCGTTGATGAGCATATTGTTTGA

Upstream 100 bases:

>100_bases
TGTGGGCGTCGTGGTAGTGATCGCTTGCTGTACTCCAATGATGGCCTGATTTATCTGACCCAAGATCACTATAAGCATTT
CATTCGGATGGAGTAAGAAG

Downstream 100 bases:

>100_bases
TAAATGCATTGTTTGATGAATGCATTGTTTGATGAATACACTATTTTGTGAATAGATTACGCCCGCCAACAGTATTGAGT
CGGGAGCCGGGAGTGACCCG

Product: putative ribonuclease inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MVKVVFDFNHIPDLPAFYRAFSQNFALSEDFGANLDALWDVVTGEIALPVEIEFVHFSRRHQRRFAAIVLLLEEAEEELA
GRLHFNVVDEHIV

Sequences:

>Translated_93_residues
MVKVVFDFNHIPDLPAFYRAFSQNFALSEDFGANLDALWDVVTGEIALPVEIEFVHFSRRHQRRFAAIVLLLEEAEEELA
GRLHFNVVDEHIV
>Mature_93_residues
MVKVVFDFNHIPDLPAFYRAFSQNFALSEDFGANLDALWDVVTGEIALPVEIEFVHFSRRHQRRFAAIVLLLEEAEEELA
GRLHFNVVDEHIV

Specific function: Unknown

COG id: COG2732

COG function: function code K; Barstar, RNAse (barnase) inhibitor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the barstar family [H]

Homologues:

Organism=Escherichia coli, GI1789635, Length=84, Percent_Identity=52.3809523809524, Blast_Score=89, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000468 [H]

Pfam domain/function: PF01337 Barstar [H]

EC number: NA

Molecular weight: Translated: 10739; Mature: 10739

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVVFDFNHIPDLPAFYRAFSQNFALSEDFGANLDALWDVVTGEIALPVEIEFVHFSRR
CEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEECCEEEEEEECHHH
HQRRFAAIVLLLEEAEEELAGRLHFNVVDEHIV
HHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC
>Mature Secondary Structure
MVKVVFDFNHIPDLPAFYRAFSQNFALSEDFGANLDALWDVVTGEIALPVEIEFVHFSRR
CEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCEECCEEEEEEECHHH
HQRRFAAIVLLLEEAEEELAGRLHFNVVDEHIV
HHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]