| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is mreC [H]
Identifier: 218930677
GI number: 218930677
Start: 4088544
End: 4089539
Strand: Direct
Name: mreC [H]
Synonym: YPO3666
Alternate gene names: 218930677
Gene position: 4088544-4089539 (Clockwise)
Preceding gene: 218930676
Following gene: 218930678
Centisome position: 87.86
GC content: 50.9
Gene sequence:
>996_bases ATGAAGCCGATTTTTAGTCGGGGTCCATCCCTGCAACTGCGACTCTTCTTTGCCATTATTGCGGCCATTGTACTGGTTAT TGCTGATAGCCGGTTGGGTACGTTCGTTAAAATACGGACTTACATGGACACCGCAGTTAGCCCTTTCTATTTTCTGGCCA ATGGGCCACGTAAAATTCTCGACAACGTTTCTGATACGCTAGCCACTCGCGAACAACTGGAGTTGGAGAATCGTGCGTTA CGCCAAGAGCTGTTACTGAAAAATACCGATCTTCAATTACTGGGGCAGTTTAAACAGGAAAACAACCGCTTACGGGAATT ATTGGGTTCTCCTCTGCGTCAGGATGAGCAAAAAATGGTGACTCAGGTCATGTCCAGCGGGACAGACCCTTATAGTGATC ATGTTGTGATTGATAAAGGCTCGAACAGCGGCGTTTATGAGGGCCAACCGGTCATTAGTGATCGCGGTGTCGTCGGCCAG GTTGTTGCAGTGAGTAAATTTACCAGCCGCGTATTATTGATTTGCGATGCTTCCCATGCACTGCCTATTCAGGTGCTGCG TAATGATATTCGGGTGATTGCTGCCGGTAGCGGGTGTAGCGATGATTTATTATTGGAGCATTTACCCAGTAATACAGATA TTCGTGTAGGCGATGTGCTGGTAACGTCGGGCTTGGGTGGGCGCTTCCCTGAAGGCTATCCCGTTGCCGTTGTCTCTTCG GTCAAAGTCGACAACCAGCGCGCTTATACGGTTATTCAAGCTCGGCCCACCGCAGATTTACAACGCTTACGTTATTTACT GCTATTGTGGGGCGCTGATCGTAATGGTGATATGCCAATGCCACCGGATGAGGTACGCCGGGTCGCCAATGAACGTCTGG CACCAATGATGTCTCAGGTGTTGCCTTCTGCTGATGCTATGGGGCCGCCTGCGCCTGCCGCATCTACGCCCGCGGGTGCC ACACCAGGAGTTGTCACACCAGGAGTTTCGCCGTGA
Upstream 100 bases:
>100_bases GCGAATGAATAACGCTAACACTGCTGTAATTTCAAGTGACAAGGTATTTTACTTACCCGATTTAGTGTCTCCTCTTGTTG TCGAGGAATACGCATAATTT
Downstream 100 bases:
>100_bases ATCGTTACAGTAGTCATGGTCGCTGGGTTATCTGGCTATCCTTCCTGATTGCGATGGTGCTGCAAATTATGCCGTGGCCT GAACAGATCTATATGTTTCG
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 331; Mature: 331
Protein sequence:
>331_residues MKPIFSRGPSLQLRLFFAIIAAIVLVIADSRLGTFVKIRTYMDTAVSPFYFLANGPRKILDNVSDTLATREQLELENRAL RQELLLKNTDLQLLGQFKQENNRLRELLGSPLRQDEQKMVTQVMSSGTDPYSDHVVIDKGSNSGVYEGQPVISDRGVVGQ VVAVSKFTSRVLLICDASHALPIQVLRNDIRVIAAGSGCSDDLLLEHLPSNTDIRVGDVLVTSGLGGRFPEGYPVAVVSS VKVDNQRAYTVIQARPTADLQRLRYLLLLWGADRNGDMPMPPDEVRRVANERLAPMMSQVLPSADAMGPPAPAASTPAGA TPGVVTPGVSP
Sequences:
>Translated_331_residues MKPIFSRGPSLQLRLFFAIIAAIVLVIADSRLGTFVKIRTYMDTAVSPFYFLANGPRKILDNVSDTLATREQLELENRAL RQELLLKNTDLQLLGQFKQENNRLRELLGSPLRQDEQKMVTQVMSSGTDPYSDHVVIDKGSNSGVYEGQPVISDRGVVGQ VVAVSKFTSRVLLICDASHALPIQVLRNDIRVIAAGSGCSDDLLLEHLPSNTDIRVGDVLVTSGLGGRFPEGYPVAVVSS VKVDNQRAYTVIQARPTADLQRLRYLLLLWGADRNGDMPMPPDEVRRVANERLAPMMSQVLPSADAMGPPAPAASTPAGA TPGVVTPGVSP >Mature_331_residues MKPIFSRGPSLQLRLFFAIIAAIVLVIADSRLGTFVKIRTYMDTAVSPFYFLANGPRKILDNVSDTLATREQLELENRAL RQELLLKNTDLQLLGQFKQENNRLRELLGSPLRQDEQKMVTQVMSSGTDPYSDHVVIDKGSNSGVYEGQPVISDRGVVGQ VVAVSKFTSRVLLICDASHALPIQVLRNDIRVIAAGSGCSDDLLLEHLPSNTDIRVGDVLVTSGLGGRFPEGYPVAVVSS VKVDNQRAYTVIQARPTADLQRLRYLLLLWGADRNGDMPMPPDEVRRVANERLAPMMSQVLPSADAMGPPAPAASTPAGA TPGVVTPGVSP
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Inner Membrane-Anchored [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
Organism=Escherichia coli, GI1789648, Length=316, Percent_Identity=81.3291139240506, Blast_Score=479, Evalue=1e-137,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 35924; Mature: 35924
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIFSRGPSLQLRLFFAIIAAIVLVIADSRLGTFVKIRTYMDTAVSPFYFLANGPRKIL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCEEEECCCHHHHH DNVSDTLATREQLELENRALRQELLLKNTDLQLLGQFKQENNRLRELLGSPLRQDEQKMV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TQVMSSGTDPYSDHVVIDKGSNSGVYEGQPVISDRGVVGQVVAVSKFTSRVLLICDASHA HHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCC LPIQVLRNDIRVIAAGSGCSDDLLLEHLPSNTDIRVGDVLVTSGLGGRFPEGYPVAVVSS CHHHHHHCCEEEEEECCCCCHHHHHHHCCCCCCEEECCEEEECCCCCCCCCCCCEEEEEE VKVDNQRAYTVIQARPTADLQRLRYLLLLWGADRNGDMPMPPDEVRRVANERLAPMMSQV EEECCCEEEEEEEECCCHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LPSADAMGPPAPAASTPAGATPGVVTPGVSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKPIFSRGPSLQLRLFFAIIAAIVLVIADSRLGTFVKIRTYMDTAVSPFYFLANGPRKIL CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCEEEECCCHHHHH DNVSDTLATREQLELENRALRQELLLKNTDLQLLGQFKQENNRLRELLGSPLRQDEQKMV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH TQVMSSGTDPYSDHVVIDKGSNSGVYEGQPVISDRGVVGQVVAVSKFTSRVLLICDASHA HHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCC LPIQVLRNDIRVIAAGSGCSDDLLLEHLPSNTDIRVGDVLVTSGLGGRFPEGYPVAVVSS CHHHHHHCCEEEEEECCCCCHHHHHHHCCCCCCEEECCEEEECCCCCCCCCCCCEEEEEE VKVDNQRAYTVIQARPTADLQRLRYLLLLWGADRNGDMPMPPDEVRRVANERLAPMMSQV EEECCCEEEEEEEECCCHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH LPSADAMGPPAPAASTPAGATPGVVTPGVSP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2687239; 9278503; 3049542 [H]