Definition | Yersinia pestis CO92 chromosome, complete genome. |
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Accession | NC_003143 |
Length | 4,653,728 |
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The map label for this gene is prmA [H]
Identifier: 218930666
GI number: 218930666
Start: 4075024
End: 4075905
Strand: Reverse
Name: prmA [H]
Synonym: YPO3656
Alternate gene names: 218930666
Gene position: 4075905-4075024 (Counterclockwise)
Preceding gene: 218930667
Following gene: 218930665
Centisome position: 87.58
GC content: 53.06
Gene sequence:
>882_bases ATGCCTTGGATCCAACTAAAATTAAACACCACCGGCAACCAAGCCGAATCCCTAGGGGACGTTCTGGTAGAAAGTGGTGC TGTGTCGGTCACTTTTCAGGACACCCACGATAATCCGGTCTTCGAGCCACTGCCTGGTGAAACCCGTCTGTGGGGCGATA CCGATGTCATTGGCCTGTATGATGCAGAAACCGATATGGCTGACGTGGTCGCCATGTTGGAATGCCACCCGCAGATCGGC AAAGGCTTTATCCATAAAATTGAACAGTTGGAAGATAAAGATTGGGAACGTGAATGGATGGATAACTTCCATCCGATGCG TTTTGGTGAGCGCCTGTGGATCTGCCCAAGCTGGCGTGATGTGCCAGATCCAACGGCGGTTAACGTTATGCTCGACCCCG GCTTAGCCTTTGGTACGGGTACCCACCCTACCACAGCACTATGCTTACAATGGCTAGATAGCCTCGATCTCAATGGTAAA ACCCTCATCGATTTCGGTTGTGGCTCTGGCATCCTGGCGATTGCCGCGCTAAAGCTCGGTGCAGCGCGCGCTATTGGCAT TGATATCGATCCGCAGGCCATTCAAGCCAGTCGCGATAACGCGCAGCGTAACGGCGTTTCAGAGCGTTTGGAGCTGTATC TGGCAAAAGACCAGCCCGCAGAACTATCTGCTGACGTGGTCGTGGCCAATATTCTGGCAGGCCCATTACGGGAACTGGCA CCACTGATTAGCGTTTTACCGACGACGGGCGGCCATCTTGGGTTGTCTGGGGTATTAGCAACACAAGCGGCGGGCGTCGC ACAGGCCTATGAGGATAAATTCATTCTCGACCCAGTCGCCGAGAAAGAAGAATGGTGCCGCATTACCGGTATCAAAAAAT AA
Upstream 100 bases:
>100_bases CCCCGCCATCGTCAGTGCCGATTAACATCACTATTACTCTATCAACACATCAGCCGGTATCGTGGTTATGGCCCCGATAC CGGCGCTTGAGAGAATTGCT
Downstream 100 bases:
>100_bases TTTTGCCTTAACTGACGCACACGGACTTGAGTCCGTGTGCGTCACAACTCACCTTTCAACGCCAGCCACCTTTCATCATC AACAATCCTTCATCATCAAC
Product: ribosomal protein L11 methyltransferase
Products: NA
Alternate protein names: L11 Mtase [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MPWIQLKLNTTGNQAESLGDVLVESGAVSVTFQDTHDNPVFEPLPGETRLWGDTDVIGLYDAETDMADVVAMLECHPQIG KGFIHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRDVPDPTAVNVMLDPGLAFGTGTHPTTALCLQWLDSLDLNGK TLIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPAELSADVVVANILAGPLRELA PLISVLPTTGGHLGLSGVLATQAAGVAQAYEDKFILDPVAEKEEWCRITGIKK
Sequences:
>Translated_293_residues MPWIQLKLNTTGNQAESLGDVLVESGAVSVTFQDTHDNPVFEPLPGETRLWGDTDVIGLYDAETDMADVVAMLECHPQIG KGFIHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRDVPDPTAVNVMLDPGLAFGTGTHPTTALCLQWLDSLDLNGK TLIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPAELSADVVVANILAGPLRELA PLISVLPTTGGHLGLSGVLATQAAGVAQAYEDKFILDPVAEKEEWCRITGIKK >Mature_292_residues PWIQLKLNTTGNQAESLGDVLVESGAVSVTFQDTHDNPVFEPLPGETRLWGDTDVIGLYDAETDMADVVAMLECHPQIGK GFIHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRDVPDPTAVNVMLDPGLAFGTGTHPTTALCLQWLDSLDLNGKT LIDFGCGSGILAIAALKLGAARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPAELSADVVVANILAGPLRELAP LISVLPTTGGHLGLSGVLATQAAGVAQAYEDKFILDPVAEKEEWCRITGIKK
Specific function: Methylates ribosomal protein L11 [H]
COG id: COG2264
COG function: function code J; Ribosomal protein L11 methylase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. PrmA family [H]
Homologues:
Organism=Escherichia coli, GI2367208, Length=293, Percent_Identity=84.9829351535836, Blast_Score=478, Evalue=1e-136,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010456 - InterPro: IPR004498 [H]
Pfam domain/function: PF06325 PrmA [H]
EC number: 2.1.1.- [C]
Molecular weight: Translated: 31849; Mature: 31717
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWIQLKLNTTGNQAESLGDVLVESGAVSVTFQDTHDNPVFEPLPGETRLWGDTDVIGLY CCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCEEEEE DAETDMADVVAMLECHPQIGKGFIHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRD ECCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCCCC VPDPTAVNVMLDPGLAFGTGTHPTTALCLQWLDSLDLNGKTLIDFGCGSGILAIAALKLG CCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPAELSADVVVANILAGPLRELA CCEEEECCCCHHHHHCCHHHHHHCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH PLISVLPTTGGHLGLSGVLATQAAGVAQAYEDKFILDPVAEKEEWCRITGIKK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHEEECCCCC >Mature Secondary Structure PWIQLKLNTTGNQAESLGDVLVESGAVSVTFQDTHDNPVFEPLPGETRLWGDTDVIGLY CEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCEEEEE DAETDMADVVAMLECHPQIGKGFIHKIEQLEDKDWEREWMDNFHPMRFGERLWICPSWRD ECCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCEEEECCCCCC VPDPTAVNVMLDPGLAFGTGTHPTTALCLQWLDSLDLNGKTLIDFGCGSGILAIAALKLG CCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHC AARAIGIDIDPQAIQASRDNAQRNGVSERLELYLAKDQPAELSADVVVANILAGPLRELA CCEEEECCCCHHHHHCCHHHHHHCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHH PLISVLPTTGGHLGLSGVLATQAAGVAQAYEDKFILDPVAEKEEWCRITGIKK HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: Catalyzes the methylation of ribosomal protein L11 by S-adenosyl methionine [C]
General reaction: Transferases; Transferring one-carbon groups; Methyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA