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The map label for this gene is yrbE [H]

Identifier: 218930628

GI number: 218930628

Start: 4035633

End: 4036763

Strand: Reverse

Name: yrbE [H]

Synonym: YPO3618

Alternate gene names: 218930628

Gene position: 4036763-4035633 (Counterclockwise)

Preceding gene: 218930630

Following gene: 218930627

Centisome position: 86.74

GC content: 46.68

Gene sequence:

>1131_bases
ATGGATACATTAATTAGCCAATTAGAGCACGCAACCCAGCCTGTACTACCGAAACGACGGGATTACCGCATCGGGATTAT
TGGTGCAGGTTTTATCGTTGAGCATTGCCATCTGGTTGCTTATCAAAAAGCAGGCTTCGTGCCTTATGGCATAACCTCAA
AGGAGCATAGCCAGAATCACCGGTTGGCTGAGACATTTGCGATAAAAAAAGTTTATGAGACATGGCAGGATATGGTTTGC
GATCCGCAGATCGACATTATCGATATTGCCGTCCCACCGCATATCCAACTCGAAATTGTGCGCTTTATTTGTGAAAGCAA
TTCTGCGGCCAAACATATCAAAGGCATTCTTTGTCAGAAACCACTGGCAATGTCGCTGAAGGATGGCCGTGAGATTGTGC
GTCTTAGCCAACAGAGTGGTATTCCCATCGCGGTTAACTCTAATATGCGCTATGACCCTTCCATGCGGGCACTTAAATAT
ATTCTTGAGAATCAACTGATCGGCGATCCTGTTATTGCCAGCATAGATATGCGCGCTATTCCAGACTGGCAGGCTTTTTT
GCAAAAATATAAAAAGCTCGAACTGTATGCCATGGCAATCCACCATATTGATGCTTTCCGGTTTTTATTTGGTGACCCGG
TAAAAGTAACCGCAGTATGTCGCACTGATCCGCGAACCACCTTTGAACATATTGACGGGATCACCCAATACACTTTCCAG
TACGCAAATGGTCTGATCGCAACCAGCCTTGATGATGTGTGGGCATGGCCGGGTGAACCTTGCGCCAAAAATAACTACAT
CAACTGGCGCGTAGAGGGAAGTGACGGACTGGCAGAAGGTGATTTCGGCTGGCATCGTCGGGAACCTGAATATTGCGGAA
GTACCTTGAAATTGGCGTCGCGGAATCATCCCGGACAATGGATCGCCCCAAAATGGGAAAGACAATGGTTCCCGGATGCA
TTTATCGGCACCATGGCAAATTTGATGTGCGCTATTGAAGAAAACCGCCCCCCGGAAATAAGTGCAGAAGACAATCTTGG
TACGCTGGCCTGTATTGAGGCTTGTTATCTCTCTATTCAGCAAGAGAGAACCGTCTATCTCAATGAAATACTCCTGGAGA
ATGCAAAATGA

Upstream 100 bases:

>100_bases
GTTCTGCCTATAACGTCTTATCCCACAACGGACTAAAGTAATCACATGTCCACCGCGGATGGATAAACGCCAGAAGCAAA
GATGACCAACTGGAGGCATT

Downstream 100 bases:

>100_bases
TTAACGTTGGCATCTTTACCGGTTATTACCCTTACACCCTGAGTGGCACCATCGACAAAATTAAGCAGGCGGGTATGGGA
TGTGTGCAACTCGATCTTGA

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MDTLISQLEHATQPVLPKRRDYRIGIIGAGFIVEHCHLVAYQKAGFVPYGITSKEHSQNHRLAETFAIKKVYETWQDMVC
DPQIDIIDIAVPPHIQLEIVRFICESNSAAKHIKGILCQKPLAMSLKDGREIVRLSQQSGIPIAVNSNMRYDPSMRALKY
ILENQLIGDPVIASIDMRAIPDWQAFLQKYKKLELYAMAIHHIDAFRFLFGDPVKVTAVCRTDPRTTFEHIDGITQYTFQ
YANGLIATSLDDVWAWPGEPCAKNNYINWRVEGSDGLAEGDFGWHRREPEYCGSTLKLASRNHPGQWIAPKWERQWFPDA
FIGTMANLMCAIEENRPPEISAEDNLGTLACIEACYLSIQQERTVYLNEILLENAK

Sequences:

>Translated_376_residues
MDTLISQLEHATQPVLPKRRDYRIGIIGAGFIVEHCHLVAYQKAGFVPYGITSKEHSQNHRLAETFAIKKVYETWQDMVC
DPQIDIIDIAVPPHIQLEIVRFICESNSAAKHIKGILCQKPLAMSLKDGREIVRLSQQSGIPIAVNSNMRYDPSMRALKY
ILENQLIGDPVIASIDMRAIPDWQAFLQKYKKLELYAMAIHHIDAFRFLFGDPVKVTAVCRTDPRTTFEHIDGITQYTFQ
YANGLIATSLDDVWAWPGEPCAKNNYINWRVEGSDGLAEGDFGWHRREPEYCGSTLKLASRNHPGQWIAPKWERQWFPDA
FIGTMANLMCAIEENRPPEISAEDNLGTLACIEACYLSIQQERTVYLNEILLENAK
>Mature_376_residues
MDTLISQLEHATQPVLPKRRDYRIGIIGAGFIVEHCHLVAYQKAGFVPYGITSKEHSQNHRLAETFAIKKVYETWQDMVC
DPQIDIIDIAVPPHIQLEIVRFICESNSAAKHIKGILCQKPLAMSLKDGREIVRLSQQSGIPIAVNSNMRYDPSMRALKY
ILENQLIGDPVIASIDMRAIPDWQAFLQKYKKLELYAMAIHHIDAFRFLFGDPVKVTAVCRTDPRTTFEHIDGITQYTFQ
YANGLIATSLDDVWAWPGEPCAKNNYINWRVEGSDGLAEGDFGWHRREPEYCGSTLKLASRNHPGQWIAPKWERQWFPDA
FIGTMANLMCAIEENRPPEISAEDNLGTLACIEACYLSIQQERTVYLNEILLENAK

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323975, Length=155, Percent_Identity=28.3870967741935, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 42807; Mature: 42807

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLISQLEHATQPVLPKRRDYRIGIIGAGFIVEHCHLVAYQKAGFVPYGITSKEHSQNH
CCHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHEEECCCCCCCCCCCCCCCCCCC
RLAETFAIKKVYETWQDMVCDPQIDIIDIAVPPHIQLEIVRFICESNSAAKHIKGILCQK
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
PLAMSLKDGREIVRLSQQSGIPIAVNSNMRYDPSMRALKYILENQLIGDPVIASIDMRAI
CCCCCHHCCHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCC
PDWQAFLQKYKKLELYAMAIHHIDAFRFLFGDPVKVTAVCRTDPRTTFEHIDGITQYTFQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
YANGLIATSLDDVWAWPGEPCAKNNYINWRVEGSDGLAEGDFGWHRREPEYCGSTLKLAS
HHCCEEEECCHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCHHHHHC
RNHPGQWIAPKWERQWFPDAFIGTMANLMCAIEENRPPEISAEDNLGTLACIEACYLSIQ
CCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
QERTVYLNEILLENAK
CCHHHHHHHHHHCCCC
>Mature Secondary Structure
MDTLISQLEHATQPVLPKRRDYRIGIIGAGFIVEHCHLVAYQKAGFVPYGITSKEHSQNH
CCHHHHHHHHHCCCCCCCCCCCEEEEEECHHHHHHHHHEEECCCCCCCCCCCCCCCCCCC
RLAETFAIKKVYETWQDMVCDPQIDIIDIAVPPHIQLEIVRFICESNSAAKHIKGILCQK
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHCC
PLAMSLKDGREIVRLSQQSGIPIAVNSNMRYDPSMRALKYILENQLIGDPVIASIDMRAI
CCCCCHHCCHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCC
PDWQAFLQKYKKLELYAMAIHHIDAFRFLFGDPVKVTAVCRTDPRTTFEHIDGITQYTFQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHH
YANGLIATSLDDVWAWPGEPCAKNNYINWRVEGSDGLAEGDFGWHRREPEYCGSTLKLAS
HHCCEEEECCHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCHHHHHC
RNHPGQWIAPKWERQWFPDAFIGTMANLMCAIEENRPPEISAEDNLGTLACIEACYLSIQ
CCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
QERTVYLNEILLENAK
CCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9025289 [H]