| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930615
Identifier: 218930615
GI number: 218930615
Start: 4016827
End: 4017360
Strand: Direct
Name: 218930615
Synonym: YPO3605
Alternate gene names: NA
Gene position: 4016827-4017360 (Clockwise)
Preceding gene: 218930614
Following gene: 218930616
Centisome position: 86.31
GC content: 58.43
Gene sequence:
>534_bases ATGACGGTGCTGGCCACCCAACCGGAAAGCGCGGCATTGCTGTGGCTCAACCGCCCGGATGTCGCCACCTATGGTGAGCA ACTGAGCACCCTGGAAAACCTCTCGCCCCTGTTTGTGCTCAATACCGCCGACCAGTCGGTGGCGATGGCTCGTCAACGCT GGCCGTCCGATCCCAGTCAGGTGGCCGAAAGCCAGCGCTGGGCGCGGTTGGTGGAGGCGCGTATCGGCCTGGCCGGTACC GACAGCAGCTATTTCCAGCTCCAGCAGCGCTTGCATGCGCTGTCTGAAAAATTACTCGAACAGGAACGTTCTCGGGGCAG TCTGACCATCTCCTATCTAAAAACAGCAGTTTACCAGATGCAGACCGAGCTGAACCGGGAGATACCGCTGGAGGAGTTAC TGCGCCAGTTGGCGGTGTCCGCCGATGAACATCAACCGGCCTCGCCGGTCTTGATAAAACAAATTGATGACCGCTGGAAT GCCTTACTCAGCCGTTATCACCACTTAACGCAGCAGACGAACTCTGCCCGTTAA
Upstream 100 bases:
>100_bases ACGGGGGGCGGTGCTGTGGGGCTTTGGTGCCGGTGTCCTGTGTAGTTTACTGGTGGCGACTGCGGTTTACGTTACCCAGT TCAAACCGCTGCAACAGCAA
Downstream 100 bases:
>100_bases CCTCCAGGAGACAGCAACGCGATGTTTGCTCATGATAAAGCTAATAATAATAAAGCCGCGGACAAGACCGGCACGGTGAC GCCGACCCATATCGTCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: ImpA Domain Protein
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNTADQSVAMARQRWPSDPSQVAESQRWARLVEARIGLAGT DSSYFQLQQRLHALSEKLLEQERSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVSADEHQPASPVLIKQIDDRWN ALLSRYHHLTQQTNSAR
Sequences:
>Translated_177_residues MTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNTADQSVAMARQRWPSDPSQVAESQRWARLVEARIGLAGT DSSYFQLQQRLHALSEKLLEQERSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVSADEHQPASPVLIKQIDDRWN ALLSRYHHLTQQTNSAR >Mature_176_residues TVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNTADQSVAMARQRWPSDPSQVAESQRWARLVEARIGLAGTD SSYFQLQQRLHALSEKLLEQERSRGSLTISYLKTAVYQMQTELNREIPLEELLRQLAVSADEHQPASPVLIKQIDDRWNA LLSRYHHLTQQTNSAR
Specific function: Unknown
COG id: COG3515
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20124; Mature: 19993
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNTADQSVAMARQRWPSDPSQ CCEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCHHH VAESQRWARLVEARIGLAGTDSSYFQLQQRLHALSEKLLEQERSRGSLTISYLKTAVYQM HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QTELNREIPLEELLRQLAVSADEHQPASPVLIKQIDDRWNALLSRYHHLTQQTNSAR HHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TVLATQPESAALLWLNRPDVATYGEQLSTLENLSPLFVLNTADQSVAMARQRWPSDPSQ CEECCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCHHH VAESQRWARLVEARIGLAGTDSSYFQLQQRLHALSEKLLEQERSRGSLTISYLKTAVYQM HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH QTELNREIPLEELLRQLAVSADEHQPASPVLIKQIDDRWNALLSRYHHLTQQTNSAR HHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA