| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is 218930605
Identifier: 218930605
GI number: 218930605
Start: 4002896
End: 4004212
Strand: Direct
Name: 218930605
Synonym: YPO3595
Alternate gene names: NA
Gene position: 4002896-4004212 (Clockwise)
Preceding gene: 218930604
Following gene: 218930606
Centisome position: 86.01
GC content: 51.18
Gene sequence:
>1317_bases ATGGATAAAAAACAACCAACGCTGTCATTGCGGGTCGTCAACAGCGATAAATTAGAGAGTGGCAAACAAGCCAGCAGCCT GTTTCATACGCAAGGGGGCAGTGTCGGCAGTGACGGTAGCCATCATTGGTCGATTCAGGACCAAGGCGGCAATATCAGCC CGTCACAGTTTGCTATTGAATGGCGTGATGGCTCTTTCTGCCTGCGGATGCTGAATGGCTCTCTGAACATTAATCATTCG ATGCTGACACCCAATTCGGGTTTCGTTCGCCTACAGCAAGGGGATGAAATGACGTTGGGTAATCTGGTGATCAAAAGCCA TATCAGCCGTTCTGCTGCCGATATGATCGATCCACTGATGGTGTCACCGGAGTCACTGGTATCGAGTTACAGCAACCCGA TGGATGCCATGATGGAAGGGGAGCCGTTGGCCTCGCCTCATCATCAGCAAGACAGCCGGTTAGCCGCGACGGTTAGCCAT AATTTCAGCCATGATCCATTGCGGGTATTGGAAACTGAAAGCCTGACCACGCAAGGCCATGACGCCGTGATATCTGATGC TGATCACTCTCTACAGCAGGACCGATACCGTAACCCACTTTTCTCTTCCCCGCTCTCTGATACCCCCAAGGACAGTGCTA TGGATCAGGCGTTTATCGATCTCCCGCAGATCAGTACCTTTCTTAACGGTAAACAAGCGGGGGGCAAACCAGAAGGATTA AATAACCAAATGGAACAACATCACGTTGCCATTACGCCGCTGATGCGTGGTTTTGACGCTCAACTCCCGATCCGCAACAG CCAGGAAGCTCACGATTTCCTTGAAGAGGCGGGTAAAACACTCAAAGCGACAATCGAAGGTCTGCTCGCCTTACAACGCA GCCAACATGGCTTGCGTGATAAGCACTTACGGCCGATTGAAGATAATCCATTGCGTCTGAATATGGATTACGACACCACC CTCAACTTGATGTTTGCCGATCAAAAAAGCCCGGTTCATCTTTCAGCGCCCGCCGCCGTGGCCGAAAGCCTGGATAACCT GCGTTTGCATCATCAGGCCAATCAACAGGCGATTACGCAAGCCTTGAACACCATGTTGGAAGCCTTCTCCCCTGAGCGTT TACTGACGCGTTTTACCCATTATTTGCGCAGTAATGAGCGGCAAGAGCAGGACTCCGCCTGGGCGTGGGATATGTACAAA AACTACTATAACGAGCTGGCCTCCAGCCGCCAGCAAGGTTTTGAAAAACTGTTTGGCGAAGTGTATGAGCAAGCCTATGA CCGGGCCTTACGTCAAGGCATGAAGGATAGCGAGTAA
Upstream 100 bases:
>100_bases GACGCGATGGAATAACGGTCGGCATGATGAAATAACGACCCGCGTTGTGAAATAGCGATCAGCGTTATGAAATAAGAATC AGTATTCAGGAAGAGACACC
Downstream 100 bases:
>100_bases TGAACAACGCCAGAGGCTATCTCCTGACGTGGGCATTATGTGTGGTGTTCCTGTTGTCTGGGTGCAGCGGTGCATGGGAA GCCACTAAAAAGGTCGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Type VI Secretion System FHA Domain Protein; FHA Domain Containing Protein
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MDKKQPTLSLRVVNSDKLESGKQASSLFHTQGGSVGSDGSHHWSIQDQGGNISPSQFAIEWRDGSFCLRMLNGSLNINHS MLTPNSGFVRLQQGDEMTLGNLVIKSHISRSAADMIDPLMVSPESLVSSYSNPMDAMMEGEPLASPHHQQDSRLAATVSH NFSHDPLRVLETESLTTQGHDAVISDADHSLQQDRYRNPLFSSPLSDTPKDSAMDQAFIDLPQISTFLNGKQAGGKPEGL NNQMEQHHVAITPLMRGFDAQLPIRNSQEAHDFLEEAGKTLKATIEGLLALQRSQHGLRDKHLRPIEDNPLRLNMDYDTT LNLMFADQKSPVHLSAPAAVAESLDNLRLHHQANQQAITQALNTMLEAFSPERLLTRFTHYLRSNERQEQDSAWAWDMYK NYYNELASSRQQGFEKLFGEVYEQAYDRALRQGMKDSE
Sequences:
>Translated_438_residues MDKKQPTLSLRVVNSDKLESGKQASSLFHTQGGSVGSDGSHHWSIQDQGGNISPSQFAIEWRDGSFCLRMLNGSLNINHS MLTPNSGFVRLQQGDEMTLGNLVIKSHISRSAADMIDPLMVSPESLVSSYSNPMDAMMEGEPLASPHHQQDSRLAATVSH NFSHDPLRVLETESLTTQGHDAVISDADHSLQQDRYRNPLFSSPLSDTPKDSAMDQAFIDLPQISTFLNGKQAGGKPEGL NNQMEQHHVAITPLMRGFDAQLPIRNSQEAHDFLEEAGKTLKATIEGLLALQRSQHGLRDKHLRPIEDNPLRLNMDYDTT LNLMFADQKSPVHLSAPAAVAESLDNLRLHHQANQQAITQALNTMLEAFSPERLLTRFTHYLRSNERQEQDSAWAWDMYK NYYNELASSRQQGFEKLFGEVYEQAYDRALRQGMKDSE >Mature_438_residues MDKKQPTLSLRVVNSDKLESGKQASSLFHTQGGSVGSDGSHHWSIQDQGGNISPSQFAIEWRDGSFCLRMLNGSLNINHS MLTPNSGFVRLQQGDEMTLGNLVIKSHISRSAADMIDPLMVSPESLVSSYSNPMDAMMEGEPLASPHHQQDSRLAATVSH NFSHDPLRVLETESLTTQGHDAVISDADHSLQQDRYRNPLFSSPLSDTPKDSAMDQAFIDLPQISTFLNGKQAGGKPEGL NNQMEQHHVAITPLMRGFDAQLPIRNSQEAHDFLEEAGKTLKATIEGLLALQRSQHGLRDKHLRPIEDNPLRLNMDYDTT LNLMFADQKSPVHLSAPAAVAESLDNLRLHHQANQQAITQALNTMLEAFSPERLLTRFTHYLRSNERQEQDSAWAWDMYK NYYNELASSRQQGFEKLFGEVYEQAYDRALRQGMKDSE
Specific function: Unknown
COG id: COG3456
COG function: function code T; Uncharacterized conserved protein, contains FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49047; Mature: 49047
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKQPTLSLRVVNSDKLESGKQASSLFHTQGGSVGSDGSHHWSIQDQGGNISPSQFAIE CCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEE WRDGSFCLRMLNGSLNINHSMLTPNSGFVRLQQGDEMTLGNLVIKSHISRSAADMIDPLM ECCHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH VSPESLVSSYSNPMDAMMEGEPLASPHHQQDSRLAATVSHNFSHDPLRVLETESLTTQGH CCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEHCCCCCCCCHHHEECCCCCCCCC DAVISDADHSLQQDRYRNPLFSSPLSDTPKDSAMDQAFIDLPQISTFLNGKQAGGKPEGL CCEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCC NNQMEQHHVAITPLMRGFDAQLPIRNSQEAHDFLEEAGKTLKATIEGLLALQRSQHGLRD CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KHLRPIEDNPLRLNMDYDTTLNLMFADQKSPVHLSAPAAVAESLDNLRLHHQANQQAITQ CCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH ALNTMLEAFSPERLLTRFTHYLRSNERQEQDSAWAWDMYKNYYNELASSRQQGFEKLFGE HHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYEQAYDRALRQGMKDSE HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDKKQPTLSLRVVNSDKLESGKQASSLFHTQGGSVGSDGSHHWSIQDQGGNISPSQFAIE CCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEE WRDGSFCLRMLNGSLNINHSMLTPNSGFVRLQQGDEMTLGNLVIKSHISRSAADMIDPLM ECCHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH VSPESLVSSYSNPMDAMMEGEPLASPHHQQDSRLAATVSHNFSHDPLRVLETESLTTQGH CCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEHCCCCCCCCHHHEECCCCCCCCC DAVISDADHSLQQDRYRNPLFSSPLSDTPKDSAMDQAFIDLPQISTFLNGKQAGGKPEGL CCEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCC NNQMEQHHVAITPLMRGFDAQLPIRNSQEAHDFLEEAGKTLKATIEGLLALQRSQHGLRD CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KHLRPIEDNPLRLNMDYDTTLNLMFADQKSPVHLSAPAAVAESLDNLRLHHQANQQAITQ CCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH ALNTMLEAFSPERLLTRFTHYLRSNERQEQDSAWAWDMYKNYYNELASSRQQGFEKLFGE HHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VYEQAYDRALRQGMKDSE HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA